RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CEACAM3P40198 252 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 EPDR1Q9UM22 224 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 A6NNC1 897 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 SLC25A5P05141 298 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 GZMBP10144 247 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 PLP1P60201 277 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 NDPQ00604 133 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 C5orf64Q2M2E5 130 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 BAGE2Q86Y30 109 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 RAX2Q96IS3 184 aa6.29□□□□□ -1.4
PDLIM5-204ENST00000380176 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 TRAV9-1A0A075B6T8 112 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 SNURFLB1AK76 121 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 F2Z2F3 143 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 CX3CL1P78423 397 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 C8orf86Q6ZUL3 223 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 GBGT1Q8N5D6 347 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 RASL11BQ9BPW5 248 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 SLC25A39Q9BZJ4 359 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 ABCA2Q9BZC7 2435 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 NCBP2LA6PVI3 153 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 ZNF705GA8MUZ8 300 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 LINC00310P59036 64 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 PRR27Q6MZM9 219 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 Q71RC1 249 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 SIRPDQ9H106 197 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 ZNF586Q9NXT0 402 aa6.28□□□□□ -1.4
PDLIM5-204ENST00000380176 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TGFAP01135 160 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 MALP21145 153 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 MRPL54Q6P161 138 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 KIR3DL3Q8N743 410 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 STXBP6Q8NFX7 210 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 SRSF8Q9BRL6 282 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 Q9H3A6 140 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 C7orf69Q9H7B7 122 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 CACNA1AO00555 2505 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 LCE2BO14633 110 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 NPSP0C0P6 89 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 USF2Q15853 346 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TMEM183BQ1AE95 376 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 LINC00322Q6ZN03 302 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 C17orf77Q96MU5 243 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 BPESC1Q9GZL8 116 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 MRPL27Q9P0M9 148 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TOX4O94842 621 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 EFNA4P52798 201 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TMEM136Q6ZRR5 245 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 EXOC3-AS1Q8N2X6 119 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 Q8N6K4 173 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 RNASE8Q8TDE3 154 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 TMEM18Q96B42 140 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 PRO1933Q9H354 126 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 KLF12Q9Y4X4 402 aa6.27□□□□□ -1.41
PDLIM5-204ENST00000380176 FLNCQ14315 2725 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV3-23P01764 117 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 UBE2G1P62253 170 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF562Q6V9R5 426 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 ZNF491Q8N8L2 437 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 TBX15Q96SF7 602 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 NAT8BQ9UHF3 227 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 CRYBG3Q68DQ2 2970 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 IGSF10Q6WRI0 2623 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 IGLV11-55A0A075B6I3 123 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 TCRAP04437 139 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 EGR2P11161 476 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 CRISP2P16562 243 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 LMO4P61968 165 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 MRPL52Q86TS9 123 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 ARPC1AQ92747 370 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 LPAR2Q9HBW0 351 aa6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 PEF1Q9UBV8 284 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-204ENST00000380176 UTP20O75691 2785 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 IGHV2-70DA0A0C4DH43 119 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 VWC2LB2RUY7 222 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 SERF1AO75920 110 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 IL4P05112 153 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 EBI3Q14213 229 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 PRR31Q5SQ13 230 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 FAM231DQ6ZW35 169 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 C5orf17Q8NAS9 161 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 OR5R1Q8NH85 324 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 ASCL2Q99929 193 aa6.25□□□□□ -1.41
PDLIM5-204ENST00000380176 ATG101Q9BSB4 218 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms