RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 Q9HAA7 133 aa11.56□□□□□ -0.56
TRIM13-202ENST00000378182 OVOL3O00110 214 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 IGLV3-19P01714 112 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 CR1LQ2VPA4 569 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 SPATA31B1PQ5VZV4 182 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 ERG28Q9UKR5 140 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 D6R8Y8 96 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 SH2D1AO60880 128 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 TRAV9-2A0A087WT02 112 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 FAM223BA6NKX1 122 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 ATXN8Q156A1 80 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 RASL10AQ92737 203 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 SNHG12Q9BXW3 62 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 NTN3O00634 580 aaPredicted RBP11.55□□□□□ -0.56
TRIM13-202ENST00000378182 AZU1P20160 251 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 MST1P26927 711 aa11.55□□□□□ -0.56
TRIM13-202ENST00000378182 A6NNC1 897 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 IGHV3-38A0A0C4DH36 116 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 C5orf24Q7Z6I8 188 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 BMPERQ8N8U9 685 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 SPTBN1Q01082 2364 aaKnown RBP11.54□□□□□ -0.56
TRIM13-202ENST00000378182 SERF1AO75920 110 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 IL18BPO95998 194 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 PFN2P35080 140 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 CACNA1BQ00975 2339 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 USMG5Q96IX5 58 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 ZNF138P52744 262 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 MEGF9Q9H1U4 602 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 NCKAP5O14513 1909 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 LYZL1Q6UWQ5 148 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 GGNQ86UU5 652 aa11.54□□□□□ -0.56
TRIM13-202ENST00000378182 M0R1W7 72 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
TRIM13-202ENST00000378182 CEP250Q9BV73 2442 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 DENND4AQ7Z401 1863 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 DYSFO75923 2080 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE6Q13070 117 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 NRN1Q9NPD7 142 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 ABCA4P78363 2273 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 PRTN3P24158 256 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 DEFB105AQ8NG35 78 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 LGALS1P09382 135 aaKnown RBP11.53□□□□□ -0.56
TRIM13-202ENST00000378182 RPL23P62829 140 aaKnown RBP11.53□□□□□ -0.56
TRIM13-202ENST00000378182 IFITM3Q01628 133 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 GAFA1Q96PS6 74 aa11.53□□□□□ -0.56
TRIM13-202ENST00000378182 MED12Q93074 2177 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE2EQ4V326 116 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.56
TRIM13-202ENST00000378182 TRAV8-3A0A0A6YYJ7 113 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 A0A0J9YY99 117 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 IGKV1OR2-108A0A075B7D4 117 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 ESDP10768 282 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 RBMY1FQ15415 496 aaKnown RBP11.52□□□□□ -0.57
TRIM13-202ENST00000378182 HAPLN4Q86UW8 402 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 TNFRSF14Q92956 283 aa11.52□□□□□ -0.57
TRIM13-202ENST00000378182 A0A0A6YYD4 124 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 H0YJW9 148 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 TBX6O95947 436 aaPredicted RBP11.51□□□□□ -0.57
TRIM13-202ENST00000378182 UBE2BP63146 152 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
TRIM13-202ENST00000378182 OCC1Q8TAD7 63 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 ERVH48-1M5A8F1 160 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 CCL20P78556 96 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 K7ENP7 123 aa11.51□□□□□ -0.57
TRIM13-202ENST00000378182 CD5P06127 495 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 IFI27L1Q96BM0 104 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 WDR81Q562E7 1941 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 IGKV2D-24A0A075B6R9 120 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 A0A1B0GTI1 187 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 NAA38Q9BRA0 125 aaKnown RBP11.5□□□□□ -0.57
TRIM13-202ENST00000378182 NEUROG3Q9Y4Z2 214 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 FNDC1Q4ZHG4 1894 aaPredicted RBP11.5□□□□□ -0.57
TRIM13-202ENST00000378182 COL4A6Q14031 1691 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 NXPH4O95158 308 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 IFI6P09912 130 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 MDS2Q8NDY4 140 aa11.5□□□□□ -0.57
TRIM13-202ENST00000378182 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 VWC2Q2TAL6 325 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 ATP6V0E1O15342 81 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 MGST2Q99735 147 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 DAZ1Q9NQZ3 744 aaKnown RBP11.49□□□□□ -0.57
TRIM13-202ENST00000378182 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 PMVKQ15126 192 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 IGLV3-12A0A075B6K2 115 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 IGKV1-5P01602 117 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
TRIM13-202ENST00000378182 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
TRIM13-202ENST00000378182 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 ZNF98A6NK75 572 aa11.48□□□□□ -0.57
TRIM13-202ENST00000378182 VCYO14598 125 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms