RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 TCRAP04437 139 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 KRTAP27-1Q3LI81 207 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 Q8TAT8 98 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 NAV3Q8IVL0 2385 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 TRAV41A0A0B4J266 112 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
NPHP4-203ENST00000378169 ZNF56Q15929 161 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 MAPK1IP1LQ8NDC0 245 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 TRAV9-1A0A075B6T8 112 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 AMBPP02760 352 aa10.66□□□□□ -0.7
NPHP4-203ENST00000378169 HERVK_113P61574 105 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 PAX8Q06710 450 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 IGFBPL1Q8WX77 278 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 NDUFA4L2Q9NRX3 87 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 LOC102724200A0A096LPH7 203 aaPredicted RBP10.65□□□□□ -0.7
NPHP4-203ENST00000378169 M0R1W7 72 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 FOXL1Q12952 345 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 MINOS1Q5TGZ0 78 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 SLX1AQ9BQ83 275 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.7
NPHP4-203ENST00000378169 NPFFO15130 113 aa10.65□□□□□ -0.71
NPHP4-203ENST00000378169 TEX36Q5VZQ5 186 aa10.65□□□□□ -0.71
NPHP4-203ENST00000378169 TSKUQ8WUA8 353 aa10.65□□□□□ -0.71
NPHP4-203ENST00000378169 CTSZQ9UBR2 303 aa10.65□□□□□ -0.71
NPHP4-203ENST00000378169 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 RNF5Q99942 180 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 HIVEP2P31629 2446 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 A0A1B0GV90 55 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
NPHP4-203ENST00000378169 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 C3orf36Q3SXR2 165 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 GTF2H5Q6ZYL4 71 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 REC114Q7Z4M0 266 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
NPHP4-203ENST00000378169 SYT8Q8NBV8 401 aa10.64□□□□□ -0.71
NPHP4-203ENST00000378169 PARD6GQ9BYG4 376 aaPredicted RBP10.64□□□□□ -0.71
NPHP4-203ENST00000378169 CEACAM4O75871 244 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 MOB4Q9Y3A3 225 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 GCSHP23434 173 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF833PQ6ZTB9 187 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 OR1N2Q8NGR9 330 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 SORL1Q92673 2214 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 JMJD1CQ15652 2540 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF414Q96IQ9 312 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 GNB1LQ9BYB4 327 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF324O75467 553 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-203ENST00000378169 TSPOP30536 169 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 ASIPP42127 132 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 ITLN2Q8WWU7 325 aaPredicted RBP10.63□□□□□ -0.71
NPHP4-203ENST00000378169 SLC50A1Q9BRV3 221 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 NPFFR1Q9GZQ6 430 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 PRDM13Q9H4Q3 707 aa10.63□□□□□ -0.71
NPHP4-203ENST00000378169 MUC22E2RYF6 1773 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-203ENST00000378169 TCF21O43680 179 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 RAX2Q96IS3 184 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 TMEM160Q9NX00 188 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 SZT2Q5T011 3432 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 A6NDN8 102 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 OOSP1A8MZH6 123 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 Q6AWC8 147 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-203ENST00000378169 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 G3V318 75 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 J3QR89 54 aa10.62□□□□□ -0.71
NPHP4-203ENST00000378169 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
NPHP4-203ENST00000378169 TRANK1O15050 2925 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 TRAV8-6A0A0B4J262 113 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 SHISA9B4DS77 424 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 B4DSR2 109 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 C22orf46C9J442 243 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 ASPHD1Q5U4P2 390 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF562Q6V9R5 426 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 BEND2Q8NDZ0 799 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 NCOR1P1Q9H4R4 102 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 PLA2G2EQ9NZK7 142 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 C10orf142B7Z368 130 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 PRSS22Q9GZN4 317 aa10.61□□□□□ -0.71
NPHP4-203ENST00000378169 LINC00614P0C842 121 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 PSMB2P49721 201 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 C12orf54Q6X4T0 127 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 NUP35Q8NFH5 326 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 GGTLC3B5MD39 225 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 PFN1P07737 140 aaKnown RBP10.6□□□□□ -0.71
NPHP4-203ENST00000378169 EVI2AP22794 236 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 YAE1D1Q9NRH1 226 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 CD7P09564 240 aa10.6□□□□□ -0.71
NPHP4-203ENST00000378169 NDUFB8O95169 186 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 NCR2O95944 276 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 OR4X2Q8NGF9 303 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 FNDC10F2Z333 226 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 ATP6V0E1O15342 81 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 RRN3P1Q2M238 152 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 SIGLEC15Q6ZMC9 328 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms