RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 OR5AN1Q8NGI8 311 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 TMEM167AQ8TBQ9 72 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 RNF5Q99942 180 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MBNL3Q9NUK0 354 aaKnown RBP12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MINOS1-NBL1R4GNA1 71 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MUC21A0A0G2JKD1 596 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MUC21A0A140T8X8 626 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 A6NNC1 897 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 CACNG7P62955 275 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 KLRD1Q13241 179 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MUC21Q5SSG8 566 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 COL8A2P25067 703 aa12.27□□□□□ -0.44
NPHP4-201ENST00000378156 AGMATQ9BSE5 352 aa12.27□□□□□ -0.44
NPHP4-201ENST00000378156 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.44
NPHP4-201ENST00000378156 TMEM95Q3KNT9 176 aa12.27□□□□□ -0.45
NPHP4-201ENST00000378156 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
NPHP4-201ENST00000378156 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
NPHP4-201ENST00000378156 LYPD2Q6UXB3 125 aa12.27□□□□□ -0.45
NPHP4-201ENST00000378156 SLC50A1Q9BRV3 221 aa12.27□□□□□ -0.45
NPHP4-201ENST00000378156 IGKCP01834 107 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 GZMBP10144 247 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 UBE2V1Q13404 147 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
NPHP4-201ENST00000378156 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
NPHP4-201ENST00000378156 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
NPHP4-201ENST00000378156 RBMY1A1P0DJD3 496 aaKnown RBP12.26□□□□□ -0.45
NPHP4-201ENST00000378156 RBMY1CP0DJD4 496 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 CNTFRP26992 372 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 IL15RAQ13261 267 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 SLX1AQ9BQ83 275 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 LY96Q9Y6Y9 160 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 B4DSR2 109 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 H0YJW9 148 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 ITLN2Q8WWU7 325 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-201ENST00000378156 MALRD1Q5VYJ5 2156 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 NBL1P41271 181 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 ACTL10Q5JWF8 245 aa12.26□□□□□ -0.45
NPHP4-201ENST00000378156 COL4A4P53420 1690 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-201ENST00000378156 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 M0R1W7 72 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 CEACAM8P31997 349 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-201ENST00000378156 GAGE2BQ13066 116 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 GAGE2EQ4V326 116 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 GAGE2DQ9UEU5 116 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-201ENST00000378156 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 IGKV1-39P01597 117 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 IGKV1D-39P04432 117 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 PLNP26678 52 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 FAM181BA6NEQ2 426 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 VDAC2P45880 294 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-201ENST00000378156 WDR86Q86TI4 376 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 C8orf46Q8TAG6 207 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 PSG8Q9UQ74 426 aa12.25□□□□□ -0.45
NPHP4-201ENST00000378156 PRB4P10163 310 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-201ENST00000378156 TRAV8-4A0A0B4J246 113 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 TRAV41A0A0B4J266 112 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 F2Z2F3 143 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 LYPD6Q86Y78 171 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 NUDT10Q8NFP7 164 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 BUB1B-PAK6H3BSN5 160 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 PAX2Q02962 417 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 TMEM219Q86XT9 240 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 PEMTQ9UBM1 199 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 CKS1BP61024 79 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 C5orf64Q2M2E5 130 aa12.24□□□□□ -0.45
NPHP4-201ENST00000378156 LMO1P25800 156 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-201ENST00000378156 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
NPHP4-201ENST00000378156 ZFAND6Q6FIF0 208 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 TECTAO75443 2155 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 PAX8Q06710 450 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 ZNF815PA8K554 130 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 TMEM155Q4W5P6 130 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 Q6ZR03 302 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 RNF182Q8N6D2 247 aa12.23□□□□□ -0.45
NPHP4-201ENST00000378156 PSG1P11464 419 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 C10orf91Q5T1B1 145 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 A0A1B0GWJ7 208 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 BRD3OSQ6XYD6 125 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 SIGLEC9Q9Y336 463 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 IGKV3OR2-268A0A0C4DH90 116 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 NDUFS6O75380 124 aaKnown RBP12.22□□□□□ -0.45
NPHP4-201ENST00000378156 MLANAQ16655 118 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 C3orf36Q3SXR2 165 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
NPHP4-201ENST00000378156 PRSS33Q8NF86 280 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 JMJD8Q96S16 334 aa12.22□□□□□ -0.45
NPHP4-201ENST00000378156 KLF17Q5JT82 389 aaPredicted RBP12.21□□□□□ -0.45
NPHP4-201ENST00000378156 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
NPHP4-201ENST00000378156 H3BUX3 64 aa12.21□□□□□ -0.45
NPHP4-201ENST00000378156 PRTN3P24158 256 aa12.21□□□□□ -0.45
NPHP4-201ENST00000378156 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.45
NPHP4-201ENST00000378156 IGKV1-16P04430 117 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms