RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 F8WDY8 70 aa8.85□□□□□ -0.99
PCDHGA1-201ENST00000378105 SUB1P53999 127 aaKnown RBP eCLIP8.85□□□□□ -0.99
PCDHGA1-201ENST00000378105 FNDC10F2Z333 226 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 NDUFB4O95168 129 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 RPL35AP18077 110 aaKnown RBP8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 NDUFV3P56181 108 aaKnown RBP8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 TMEM50BP56557 158 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 IZUMO4Q1ZYL8 232 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 AJUBAQ96IF1 538 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 VGLL1Q99990 258 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 MAP1LC3CQ9BXW4 147 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 SPRY4Q9C004 299 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 ANK2Q01484 3957 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 H3BRM9 83 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 GAGE2EQ4V326 116 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 HSD17B10Q99714 261 aaKnown RBP8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 CALYQ9NYX4 217 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 GAGE2DQ9UEU5 116 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 ARFGEF3Q5TH69 2177 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 NCOA6Q14686 2063 aaPredicted RBP8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 PSG5Q15238 335 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 IGFL3Q6UXB1 125 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 SLC25A15Q9Y619 301 aa8.84□□□□□ -0.99
PCDHGA1-201ENST00000378105 CXorf1O96002 111 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 PSMB3P49720 205 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 ZNF726P1Q15940 193 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 C4orf26Q17RF5 130 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 NEIL1Q96FI4 390 aaPredicted RBP8.83□□□□□ -1
PCDHGA1-201ENST00000378105 C18orf15Q96N68 181 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 UBE2L5PA0A1B0GUS4 154 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 CHST1O43916 411 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 REG1AP05451 166 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
PCDHGA1-201ENST00000378105 ZNF146Q15072 292 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 RABAC1Q9UI14 185 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 HCFC1P51610 2035 aa8.83□□□□□ -1
PCDHGA1-201ENST00000378105 IQCF6A8MYZ5 107 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 RHOBP62745 196 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 MYO9AB2RTY4 2548 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 USP9YO00507 2555 aaPredicted RBP8.82□□□□□ -1
PCDHGA1-201ENST00000378105 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 IGHV3-21A0A0B4J1V1 117 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 YPEL3P61236 119 aaPredicted RBP8.82□□□□□ -1
PCDHGA1-201ENST00000378105 LIAT1Q6ZQX7 453 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 TMUB1Q9BVT8 246 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 FAM215AQ9Y5M1 114 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 IGKV1-12A0A0C4DH73 117 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 NAPSAO96009 420 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 IGKV1D-12P01611 117 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 LINC00869P0C866 280 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 CD24P25063 80 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 OPRK1P41145 380 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 LINC00596Q86U02 117 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 TTC9CQ8N5M4 171 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
PCDHGA1-201ENST00000378105 OOSP1A8MZH6 123 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 PLAUP00749 431 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 CCL3L1P16619 93 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 IGFBP3P17936 291 aaPredicted RBP8.81□□□□□ -1
PCDHGA1-201ENST00000378105 SEC11AP67812 179 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 FXYD3Q14802 87 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 TMEM42Q69YG0 159 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 FLYWCH2Q96CP2 140 aaKnown RBP8.81□□□□□ -1
PCDHGA1-201ENST00000378105 TMEM70Q9BUB7 260 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 LINC00312Q9Y6C7 94 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 HOXA4Q00056 320 aaPredicted RBP8.81□□□□□ -1
PCDHGA1-201ENST00000378105 GAGE13Q4V321 117 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 FOXI2Q6ZQN5 318 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 TMEM252Q8N6L7 170 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 ZNF503-AS2A6NEH8 195 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 C9JAW5 83 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 OR13A1Q8NGR1 328 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
PCDHGA1-201ENST00000378105 HIGD1AQ9Y241 93 aa8.81□□□□□ -1
PCDHGA1-201ENST00000378105 C12orf77C9JDV5 145 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 IGHV1-46P01743 117 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 RBP4P02753 201 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 AMMECR1Q9Y4X0 333 aaPredicted RBP8.8□□□□□ -1
PCDHGA1-201ENST00000378105 IGKV1-27A0A075B6S5 117 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CT45A6P0DMU7 189 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CT45A5P0DMU8 189 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CT45A7P0DMV0 189 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 AREGP15514 252 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CRYBB3P26998 211 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CT45A1Q5HYN5 189 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 Q6ZQT7 251 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 VKORC1L1Q8N0U8 176 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 WDR31Q8NA23 367 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 CT45A3Q8NHU0 189 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 LINC01548A6NM66 108 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 ABHD12Q8N2K0 398 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 TEX45Q8NA69 505 aa8.8□□□□□ -1
PCDHGA1-201ENST00000378105 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
PCDHGA1-201ENST00000378105 IFITM1P13164 125 aa8.79□□□□□ -1
PCDHGA1-201ENST00000378105 FOXA3P55318 350 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms