RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 POU2AF1Q16633 256 aa8.77□□□□□ -1
RTN3-206ENST00000377819 SLC25A45Q8N413 288 aa8.77□□□□□ -1
RTN3-206ENST00000377819 TIMM17AQ99595 171 aa8.77□□□□□ -1
RTN3-206ENST00000377819 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 IFI6P09912 130 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 LYZL1Q6UWQ5 148 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 RNF5Q99942 180 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 RHPN1-AS1Q9BWJ2 59 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
RTN3-206ENST00000377819 C14orf132Q9NPU4 83 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 CENPVL1A0A0U1RR11 272 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 ETDCA0A1B0GVM5 59 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 IGKV2-40A0A087WW87 121 aaPredicted RBP8.77□□□□□ -1.01
RTN3-206ENST00000377819 IGKV2D-40P01614 121 aaPredicted RBP8.77□□□□□ -1.01
RTN3-206ENST00000377819 MAJINQ3KP22 176 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 FAM104BQ5XKR9 115 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 CD200R1LQ6Q8B3 271 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 DEFB104AQ8WTQ1 72 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
RTN3-206ENST00000377819 ZSWIM8A7E2V4 1837 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 TRBV5-3A0A0A0MS03 114 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 GATA4P43694 442 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 NHLRC3Q5JS37 347 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 MORN5Q5VZ52 161 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 WDR83OSQ9Y284 106 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
RTN3-206ENST00000377819 PEBP1P30086 187 aaKnown RBP8.76□□□□□ -1.01
RTN3-206ENST00000377819 RPL15P61313 204 aaKnown RBP8.76□□□□□ -1.01
RTN3-206ENST00000377819 TMEM219Q86XT9 240 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 OR11H6Q8NGC7 330 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 EFNB3Q15768 340 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 PSG3Q16557 428 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 A0A0G2JMM0 328 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 A0A1W2PPB8 328 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 KIR3DP1A8MWS1 328 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 CRYGCP07315 174 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 XCL2Q9UBD3 114 aa8.76□□□□□ -1.01
RTN3-206ENST00000377819 A0A0G2JK05 382 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 LIMS1P48059 325 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 GAS1P54826 345 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 MORN2Q502X0 79 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 STPG4Q8N801 248 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
RTN3-206ENST00000377819 SELENOKQ9Y6D0 94 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 TRAV13-2A0A0B4J235 113 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 SYNJ2BPP57105 145 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 A0A087WWL8 130 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 LYNX1G3V0Z9 82 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 IGHMP01871 453 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 ANGP03950 147 aaKnown RBP8.75□□□□□ -1.01
RTN3-206ENST00000377819 LYNX1P0DP58 116 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 SLC25A16P16260 332 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 C1orf53Q5VUE5 145 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 NRTNQ99748 197 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 TM2D1Q9BX74 207 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 DAZ1Q9NQZ3 744 aaKnown RBP8.75□□□□□ -1.01
RTN3-206ENST00000377819 GOLGB1Q14789 3259 aaKnown RBP8.75□□□□□ -1.01
RTN3-206ENST00000377819 ZNF672Q499Z4 452 aaPredicted RBP8.75□□□□□ -1.01
RTN3-206ENST00000377819 ZNF329Q86UD4 541 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 RFLNBQ8N5W9 214 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 MSRB2Q9Y3D2 182 aa8.75□□□□□ -1.01
RTN3-206ENST00000377819 IGKV1-5P01602 117 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 ADAMTSL5Q6ZMM2 481 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 ZNF883P0CG24 379 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 NABP1Q96AH0 204 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 VSIRQ9H7M9 311 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 IGKV2D-24A0A075B6R9 120 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 TRBV6-7A0A0A0MS04 114 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 PIN1P1O15428 100 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 IFITM3Q01628 133 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 ID3Q02535 119 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 MST1LQ2TV78 715 aa8.74□□□□□ -1.01
RTN3-206ENST00000377819 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 CRYBA4P53673 196 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
RTN3-206ENST00000377819 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 KNCNA6PVL3 124 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 LYPD1Q8N2G4 141 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 RPUSD1Q9UJJ7 312 aaKnown RBP8.73□□□□□ -1.01
RTN3-206ENST00000377819 SCN1AP35498 2009 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 IGLL5B9A064 214 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 C5orf67F2Z3F1 127 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 LIMS2Q7Z4I7 341 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 VMO1Q7Z5L0 202 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
RTN3-206ENST00000377819 IGKV1OR2-108A0A075B7D4 117 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 A0A0A6YYD4 124 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 ARMS2P0C7Q2 107 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 ZCCHC24Q8N2G6 241 aaKnown RBP8.72□□□□□ -1.01
RTN3-206ENST00000377819 A0A087X0K7 114 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 OVOL3O00110 214 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 LINC00271P0C7V0 271 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 C5orf64Q2M2E5 130 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 ZGRF1Q86YA3 2104 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 EXOC3-AS1Q8N2X6 119 aa8.72□□□□□ -1.01
RTN3-206ENST00000377819 FBLIM1Q8WUP2 373 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms