RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CDSNQ15517 529 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 ZFP30Q9Y2G7 519 aa9.27□□□□□ -0.93
TNFRSF9-201ENST00000377507 TRAV30A0A087WSZ9 112 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 C2orf70A6NJV1 201 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 NPIPB5A8MRT5 1133 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 KALRNO60229 2985 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 ADORA2A-AS1P86434 159 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 EBLN2Q6P2I7 272 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 C1orf122Q6ZSJ8 110 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 CIARTQ8N365 385 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 NEU4Q8WWR8 484 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 RNF125Q96EQ8 232 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 NDFIP1Q9BT67 221 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 MSRB2Q9Y3D2 182 aa9.26□□□□□ -0.93
TNFRSF9-201ENST00000377507 PIEZO2Q9H5I5 2752 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 M0R2Z0 102 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 LY6HO94772 140 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 COL8A1P27658 744 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 C5orf64Q2M2E5 130 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 ZNF562Q6V9R5 426 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 PRNTQ86SH4 94 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 GATD1Q8NB37 220 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 OR4F17Q8NGA8 305 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 CHCHD1Q96BP2 118 aaKnown RBP9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 FANCD2OSQ96PS1 177 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 UQCR10Q9UDW1 63 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 HILPDAQ9Y5L2 63 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 LOC105371242A0A075B767 164 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 FAM120AOSQ5T036 256 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 Q8N6K4 173 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 MUC6Q6W4X9 2439 aa9.25□□□□□ -0.93
TNFRSF9-201ENST00000377507 LOC102724200A0A096LPH7 203 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 PDE6HQ13956 83 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 EBI3Q14213 229 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 FBLN7Q53RD9 439 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 CYB5R2Q6BCY4 276 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 KLHDC1Q8N7A1 406 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 ZC2HC1AQ96GY0 325 aa9.24□□□□□ -0.93
TNFRSF9-201ENST00000377507 C20orf202A1L168 122 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 OOSP1A8MZH6 123 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 IL4P05112 153 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 UCNP55089 124 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 KLRB1Q12918 225 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 KLRD1Q13241 179 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 PSG3Q16557 428 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 Q71RC1 249 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 SH2D7A6NKC9 451 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 K7EQM0 130 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 MFAP4P55083 255 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 KLF17Q5JT82 389 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 CCDC144NLQ6NUI1 221 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 KIR3DL3Q8N743 410 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
TNFRSF9-201ENST00000377507 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 GNG7O60262 68 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 CD24P25063 80 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 FCGR2BP31994 310 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 CRIP1P50238 77 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 ARPC1AQ92747 370 aa9.22□□□□□ -0.93
TNFRSF9-201ENST00000377507 DCHS1Q96JQ0 3298 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 ABCA1O95477 2261 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 A0A1B0GUT8 65 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 A0A1B0GW15 77 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 CHEK1O14757 476 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 LINC00614P0C842 121 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 DTX2Q86UW9 622 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 BCL6BQ8N143 479 aaPredicted RBP9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 DYNAPQ8N1N2 210 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 TMEM70Q9BUB7 260 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 MINOS1-NBL1R4GNA1 71 aa9.21□□□□□ -0.93
TNFRSF9-201ENST00000377507 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.94
TNFRSF9-201ENST00000377507 IGHV1-24A0A0C4DH33 117 aa9.21□□□□□ -0.94
TNFRSF9-201ENST00000377507 SERTM2A0A1B0GWG4 89 aa9.21□□□□□ -0.94
TNFRSF9-201ENST00000377507 NDPQ00604 133 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms