RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 PERPQ96FX8 193 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 LOC105371242A0A075B767 164 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 TIMM23O14925 209 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 PSG1P11464 419 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 PRRX1P54821 245 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 TNXAQ16473 311 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 SPATA12Q7Z6I5 190 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
TRIM39-202ENST00000376659 FBXL15Q9H469 300 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 TCRAP04437 139 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 NBEAP1P0C6P0 100 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 CRISP2P16562 243 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 FOXA3P55318 350 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-202ENST00000376659 SIGLEC15Q6ZMC9 328 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 Q6ZVH6 145 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 SLC25A39Q9BZJ4 359 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-202ENST00000376659 ZNF469Q96JG9 3925 aaPredicted RBP7.54□□□□□ -1.2
TRIM39-202ENST00000376659 MMDQ15546 238 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 OCIAD2Q56VL3 154 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 NBPF19A0A087WUL8 3843 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 PTPRQQ9UMZ3 2332 aa7.54□□□□□ -1.2
TRIM39-202ENST00000376659 NPIPB5A8MRT5 1133 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 IGHG4P01861 327 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 ZFP36P26651 326 aaKnown RBP7.53□□□□□ -1.2
TRIM39-202ENST00000376659 TIGITQ495A1 244 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 COX19Q49B96 90 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 SHANK2-AS3Q9BTD1 123 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 SIRPDQ9H106 197 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 Q9H3A6 140 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 HLA-DQA1P01909 254 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 KLRD1Q13241 179 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 GFRA4Q9GZZ7 299 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 TLN1Q9Y490 2541 aaKnown RBP7.53□□□□□ -1.2
TRIM39-202ENST00000376659 ZNF491Q8N8L2 437 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 OR1B1Q8NGR6 318 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 ORAOV1Q8WV07 137 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 TMEM190Q8WZ59 177 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 TBX15Q96SF7 602 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 MIEN1Q9BRT3 115 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 SSBP3Q9BWW4 388 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-202ENST00000376659 INSIG2Q9Y5U4 225 aa7.53□□□□□ -1.2
TRIM39-202ENST00000376659 TRBV19A0A075B6N1 114 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 LIPFP07098 398 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 CRIP1P50238 77 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 TCL1AP56279 114 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 SLC35B1P78383 322 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 VAMP3Q15836 100 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 TTC9CQ8N5M4 171 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 TMEM75Q8N9X5 138 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 OTORQ9NRC9 128 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 RAXQ9Y2V3 346 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 APELAP0DMC3 54 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
TRIM39-202ENST00000376659 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 MRPL52Q86TS9 123 aaKnown RBP7.52□□□□□ -1.21
TRIM39-202ENST00000376659 MS4A10Q96PG2 267 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 IGHV3-21A0A0B4J1V1 117 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 K7ERU9 68 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 NBR2O15453 112 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 HYPMO75409 117 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 PRTN3P24158 256 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 FCGR2BP31994 310 aaPredicted RBP7.52□□□□□ -1.21
TRIM39-202ENST00000376659 TPPP2P59282 170 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 ZNF738Q8NE65 137 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 OR8B3Q8NGG8 313 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 GPR82Q96P67 336 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.21
TRIM39-202ENST00000376659 ZNF324O75467 553 aaPredicted RBP7.51□□□□□ -1.21
TRIM39-202ENST00000376659 PRR27Q6MZM9 219 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 BAGE2Q86Y30 109 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 C2orf70A6NJV1 201 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 ORM2P19652 201 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 KLRB1Q12918 225 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
TRIM39-202ENST00000376659 STPG4Q8N801 248 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 HSPB9Q9BQS6 159 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 RPP21Q9H633 154 aaKnown RBP7.51□□□□□ -1.21
TRIM39-202ENST00000376659 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
TRIM39-202ENST00000376659 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 ENSAO43768 121 aaKnown RBP7.51□□□□□ -1.21
TRIM39-202ENST00000376659 SRIP30626 198 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
TRIM39-202ENST00000376659 ABCA1O95477 2261 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 PKDREJQ9NTG1 2253 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 FAM231BA6NCW3 169 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 CRXO43186 299 aaPredicted RBP7.5□□□□□ -1.21
TRIM39-202ENST00000376659 COX7A1P24310 79 aa7.5□□□□□ -1.21
TRIM39-202ENST00000376659 ZC2HC1AQ96GY0 325 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms