RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LINC01560Q8TB33 94 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 SCNM1Q9BWG6 230 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 ATMQ13315 3056 aa11.53□□□□□ -0.56
MSH5-201ENST00000375703 ZNF318Q5VUA4 2279 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 MUC15Q8N387 334 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 C17orf77Q96MU5 243 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 ONECUT1Q9UBC0 465 aa11.52□□□□□ -0.56
MSH5-201ENST00000375703 MRPS16Q9Y3D3 137 aaKnown RBP11.52□□□□□ -0.56
MSH5-201ENST00000375703 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
MSH5-201ENST00000375703 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
MSH5-201ENST00000375703 HAX1O00165 279 aa11.52□□□□□ -0.57
MSH5-201ENST00000375703 TIMM23O14925 209 aa11.52□□□□□ -0.57
MSH5-201ENST00000375703 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
MSH5-201ENST00000375703 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
MSH5-201ENST00000375703 DMXL2Q8TDJ6 3036 aa11.52□□□□□ -0.57
MSH5-201ENST00000375703 TRBV19A0A075B6N1 114 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 K7EIM0 57 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 HOXB4P17483 251 aaPredicted RBP11.51□□□□□ -0.57
MSH5-201ENST00000375703 FAM120AOSQ5T036 256 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
MSH5-201ENST00000375703 OR4F17Q8NGA8 305 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 SHANK2-AS3Q9BTD1 123 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 LEPROTL1O95214 131 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 HINT1P49773 126 aaPredicted RBP11.51□□□□□ -0.57
MSH5-201ENST00000375703 SAPCD1Q5SSQ6 148 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 VKORC1Q9BQB6 163 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
MSH5-201ENST00000375703 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
MSH5-201ENST00000375703 TRBV6-1A0A0K0K1D8 114 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 OR4C46A6NHA9 309 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 NDUFB8O95169 186 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 APOHP02749 345 aaPredicted RBP11.5□□□□□ -0.57
MSH5-201ENST00000375703 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
MSH5-201ENST00000375703 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ZNF491Q8N8L2 437 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ZNF292O60281 2723 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 H3BRN7 92 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 K7EQM0 130 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
MSH5-201ENST00000375703 LIPFP07098 398 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
MSH5-201ENST00000375703 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ASCL2Q99929 193 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 HILPDAQ9Y5L2 63 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 ABCA1O95477 2261 aa11.5□□□□□ -0.57
MSH5-201ENST00000375703 DCHS1Q96JQ0 3298 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 ACACAQ13085 2346 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 SIAH2O43255 324 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 HTR1DP28221 377 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
MSH5-201ENST00000375703 ZNF138P52744 262 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 TMEM75Q8N9X5 138 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 ANKRD11Q6UB99 2663 aaPredicted RBP11.49□□□□□ -0.57
MSH5-201ENST00000375703 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 IL4P05112 153 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 TMEM11P17152 192 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 ARF6P62330 175 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 LYPD1Q8N2G4 141 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
MSH5-201ENST00000375703 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 NBR2O15453 112 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
MSH5-201ENST00000375703 C1RLQ9NZP8 487 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 RIF1Q5UIP0 2472 aaKnown RBP11.48□□□□□ -0.57
MSH5-201ENST00000375703 HLA-DRB1P01911 266 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 OR5AL1P0C617 328 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 RIGQ13278 110 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 PSG3Q16557 428 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 S4R3C0 116 aa11.48□□□□□ -0.57
MSH5-201ENST00000375703 OVOL3O00110 214 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 CSN3P07498 182 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 PIEZO2Q9H5I5 2752 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 ZFHX2Q9C0A1 2572 aaPredicted RBP11.47□□□□□ -0.57
MSH5-201ENST00000375703 FAM90A27PA6NNH2 459 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 IGFBPL1Q8WX77 278 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
MSH5-201ENST00000375703 POLEQ07864 2286 aa11.46□□□□□ -0.57
MSH5-201ENST00000375703 APC2O95996 2303 aa11.46□□□□□ -0.57
MSH5-201ENST00000375703 ZZEF1O43149 2961 aa11.46□□□□□ -0.57
MSH5-201ENST00000375703 TCF21O43680 179 aa11.46□□□□□ -0.57
MSH5-201ENST00000375703 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
MSH5-201ENST00000375703 WI2-2373I1.2A0A1W2PRP0 233 aa11.46□□□□□ -0.58
MSH5-201ENST00000375703 GNG7O60262 68 aa11.46□□□□□ -0.58
MSH5-201ENST00000375703 GRNP28799 593 aaKnown RBP11.46□□□□□ -0.58
MSH5-201ENST00000375703 CRIP1P50238 77 aa11.46□□□□□ -0.58
MSH5-201ENST00000375703 HES1Q14469 280 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms