RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 USF3Q68DE3 2245 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 TRAV9-1A0A075B6T8 112 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 A0A0D9SFI3 127 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 GGT3PA6NGU5 568 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 DEFB108AA8MXU0 73 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 SMIM1B2RUZ4 78 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 GGTLC3B5MD39 225 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 DNASE2O00115 360 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-204ENST00000375025 PHOX2AO14813 284 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 BCL2L11O43521 198 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 CXorf1O96002 111 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 STATHP02808 62 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 PSMB8P28062 276 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 HERVK_113P63121 156 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 LINC00596Q86U02 117 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 C9orf62Q8N4C0 152 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 C10orf126Q8N4M7 172 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-204ENST00000375025 APCDD1LQ8NCL9 501 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 OR8A1Q8NGG7 326 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 SLC25A40Q8TBP6 338 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 FAM104AQ969W3 186 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 LINC01587Q99440 93 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 NRTNQ99748 197 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 SLC25A21Q9BQT8 299 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-204ENST00000375025 NKX6-2Q9C056 277 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF556Q9HAH1 456 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 BOKQ9UMX3 212 aaPredicted RBP1.69□□□□□ -2.14
CCDC7-204ENST00000375025 PROCRQ9UNN8 238 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 PIKFYVEQ9Y2I7 2098 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
CCDC7-204ENST00000375025 IGLV4-3A0A075B6K6 122 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IGHV3-16A0A0C4DH30 117 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 PNMA8CA0A1B0GUJ8 204 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 DHRS12A0PJE2 317 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IRGMA1A4Y4 181 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TMEM212A6NML5 194 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF705GA8MUZ8 300 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 UBE2L6O14933 153 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CCL25O15444 150 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 COX7A2P2O60397 106 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 AKAIN1P0CW23 69 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 COX7A1P24310 79 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CRHBPP24387 322 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 GUCA1AP43080 201 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 NDUFA6P56556 154 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RPL23P62829 140 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 BTG2P78543 158 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FHL1Q13642 323 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RTL8BQ17RB0 113 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF773Q6PK81 442 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 LHFPL1Q86WI0 220 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 NR2C2APQ86WQ0 139 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 C1orf174Q8IYL3 243 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TEX37Q96LM6 180 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SOSTQ9BQB4 213 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TM2D3Q9BRN9 247 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CLEC7AQ9BXN2 247 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 AICDAQ9GZX7 198 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RPUSD1Q9UJJ7 312 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TNFSF18Q9UNG2 199 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 AMMECR1Q9Y4X0 333 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IER3IP1Q9Y5U9 82 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SOX21Q9Y651 276 aaPredicted RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 DIDO1Q9BTC0 2240 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SONP18583 2426 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 HUWE1Q7Z6Z7 4374 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IGKV1-27A0A075B6S5 117 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 IGKV1-8A0A0C4DH67 115 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TRBV7-6A0A0J9YX20 115 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 A0A1B0GW64 132 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 LEUTXA8MZ59 168 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 ZNF207O43670 478 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 SRSF10O75494 262 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 DUSP14O95147 198 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FSTL3O95633 263 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 PGAM2P15259 253 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 NTF3P20783 257 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 OPRK1P41145 380 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TMBIM6P55061 237 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CRADDP78560 199 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 EGFEM1PQ0D2K5 195 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 C1orf140Q5VVS0 124 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 WDR59Q6PJI9 974 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 MKXQ8IYA7 352 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 OR51A4Q8NGJ6 313 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 OR10AC1Q8NH08 325 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 MUC7Q8TAX7 377 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 MRPL30Q8TCC3 161 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FXYD5Q96DB9 178 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 AP1S3Q96PC3 154 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 WDR61Q9GZS3 305 aaKnown RBP1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TUBA4BQ9H853 241 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 FGF22Q9HCT0 170 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CCL28Q9NRJ3 127 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 RPRMQ9NS64 109 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 MED9Q9NWA0 146 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 CTSZQ9UBR2 303 aa1.68□□□□□ -2.14
CCDC7-204ENST00000375025 TAC3Q9UHF0 121 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms