RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
CCDC40-203ENST00000374877 CCL21O00585 134 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 HLA-DRB1P01911 266 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 PSG9Q00887 426 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 PKDREJQ9NTG1 2253 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 SPENQ96T58 3664 aaKnown RBP8.86□□□□□ -0.99
CCDC40-203ENST00000374877 ARF6P62330 175 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-203ENST00000374877 ZNF492Q9P255 531 aa8.86□□□□□ -0.99
CCDC40-203ENST00000374877 INS-IGF2F8WCM5 200 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 ASCL2Q99929 193 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 NDFIP1Q9BT67 221 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 TPPP3Q9BW30 176 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 GPR183P32249 361 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-203ENST00000374877 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 GOLT1AQ6ZVE7 132 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 TPRP12270 2363 aaKnown RBP8.85□□□□□ -0.99
CCDC40-203ENST00000374877 APOHP02749 345 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-203ENST00000374877 GP9P14770 177 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 LYZP61626 148 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 RITA1Q96K30 269 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 GFRA4Q9GZZ7 299 aa8.85□□□□□ -0.99
CCDC40-203ENST00000374877 TRAV8-6A0A0B4J262 113 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 Q86TA4 180 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 TEX45Q8NA69 505 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 OR4A5Q8NH83 315 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 AP5S1Q9NUS5 200 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 SELENOKQ9Y6D0 94 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 CD5LO43866 347 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 IGLV2-23P01705 113 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 PPBPP02775 128 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 TCTAP57738 103 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 TMEM200BQ69YZ2 307 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 BPIFA4PQ86YQ2 179 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
CCDC40-203ENST00000374877 MS4A6AQ9H2W1 248 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 FOXE3Q13461 319 aa8.84□□□□□ -0.99
CCDC40-203ENST00000374877 RNASE6Q93091 150 aaKnown RBP8.84□□□□□ -0.99
CCDC40-203ENST00000374877 GAGE12BA1L429 117 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 PPIAL4DF5H284 164 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 UQCRFS1P47985 274 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 ADORA2A-AS1P86434 159 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 FA2HQ7L5A8 372 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 PRSS3P2Q8NHM4 247 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 NEU4Q8WWR8 484 aaPredicted RBP8.83□□□□□ -1
CCDC40-203ENST00000374877 TRGV9Q99603 122 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
CCDC40-203ENST00000374877 C7orf71A4D174 169 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 SMIM15Q7Z3B0 74 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 NGBQ9NPG2 151 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
CCDC40-203ENST00000374877 HIGD1AQ9Y241 93 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 BSNQ9UPA5 3926 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 A0A1B0GUT8 65 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 HAX1O00165 279 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 CD40P25942 277 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 S100A7P31151 101 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 LINC01545Q5VT33 79 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 TEX36Q5VZQ5 186 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 TMEM108Q6UXF1 575 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 C22orf34Q6ZV56 151 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 NUP37Q8NFH4 326 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 C8orf46Q8TAG6 207 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 TMEM186Q96B77 213 aa8.83□□□□□ -1
CCDC40-203ENST00000374877 NCR2O95944 276 aa8.82□□□□□ -1
CCDC40-203ENST00000374877 THBDP07204 575 aa8.82□□□□□ -1
CCDC40-203ENST00000374877 MEF2CQ06413 473 aaPredicted RBP8.82□□□□□ -1
CCDC40-203ENST00000374877 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
CCDC40-203ENST00000374877 FAM231BA6NCW3 169 aa8.82□□□□□ -1
CCDC40-203ENST00000374877 COX8AP10176 69 aa8.82□□□□□ -1
CCDC40-203ENST00000374877 RPL27AP46776 148 aaKnown RBP8.82□□□□□ -1
CCDC40-203ENST00000374877 NPIPB6E9PJ23 425 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 CSN1S1P47710 185 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 RPS20P60866 119 aaKnown RBP8.81□□□□□ -1
CCDC40-203ENST00000374877 ZNF747Q9BV97 191 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 OTORQ9NRC9 128 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 LOC389332A0A1B0GUA5 103 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 FCN3O75636 299 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 CRYGCP07315 174 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 TNFRSF1AP19438 455 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 RIGQ13278 110 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 C2orf91Q6ZV80 131 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 OR10AG1Q8NH19 301 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 CCL17Q92583 94 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 AP1S3Q96PC3 154 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 CHD8Q9HCK8 2581 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 GAGE10A6NGK3 116 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 K7ERU9 68 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 CNTFRP26992 372 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 PRB3Q04118 309 aaPredicted RBP8.81□□□□□ -1
CCDC40-203ENST00000374877 TMEM116Q8NCL8 245 aa8.81□□□□□ -1
CCDC40-203ENST00000374877 RBP4P02753 201 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 TMEM97Q5BJF2 176 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 WFDC8Q8IUA0 241 aa8.8□□□□□ -1
CCDC40-203ENST00000374877 ZGRF1Q86YA3 2104 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms