RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PSG1P11464 419 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 MMDQ15546 238 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 NPBQ8NG41 125 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 DAZAP1Q96EP5 407 aaKnown RBP11.06□□□□□ -0.64
HMGCL-203ENST00000374490 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
HMGCL-203ENST00000374490 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 FBXL7Q9UJT9 491 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 LRBAP50851 2863 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 ARFGEF3Q5TH69 2177 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 DIRC3C9JPN6 131 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 TIMM23O14925 209 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 NDUFA3O95167 84 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 SNRPCP09234 159 aaKnown RBP11.06□□□□□ -0.64
HMGCL-203ENST00000374490 HBBP68871 147 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 LYPD1Q8N2G4 141 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 C18orf32Q8TCD1 76 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 VN1R17PQ8TDU5 208 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 CBLN4Q9NTU7 201 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
HMGCL-203ENST00000374490 TEP1Q99973 2627 aaKnown RBP11.05□□□□□ -0.64
HMGCL-203ENST00000374490 IGHV3-21A0A0B4J1V1 117 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 OOSP1A8MZH6 123 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 PMCHP20382 165 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 CDKN1AP38936 164 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 KRTDAPP60985 99 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 SLAQ13239 276 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 CYB5R2Q6BCY4 276 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 Q86TA4 180 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 BORCS7Q96B45 105 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 SHANK2-AS3Q9BTD1 123 aa11.05□□□□□ -0.64
HMGCL-203ENST00000374490 FAM103A1Q9BTL3 118 aaKnown RBP11.05□□□□□ -0.64
HMGCL-203ENST00000374490 H3BRN7 92 aa11.04□□□□□ -0.64
HMGCL-203ENST00000374490 HOXB4P17483 251 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-203ENST00000374490 RAB4AP20338 218 aa11.04□□□□□ -0.64
HMGCL-203ENST00000374490 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-203ENST00000374490 CFHR4Q92496 578 aa11.04□□□□□ -0.64
HMGCL-203ENST00000374490 ZNF48Q96MX3 618 aaPredicted RBP11.04□□□□□ -0.64
HMGCL-203ENST00000374490 RCHY1Q96PM5 261 aa11.04□□□□□ -0.64
HMGCL-203ENST00000374490 SPOCK3Q9BQ16 436 aa11.04□□□□□ -0.64
HMGCL-203ENST00000374490 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 ODF3BA8MYP8 253 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 NPIPB6E9PJ23 425 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 C19orf84I3L1E1 186 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 K7EIM0 57 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 K7EQM0 130 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 EREGO14944 169 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 APELAP0DMC3 54 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 PRTN3P24158 256 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 DLX1P56177 255 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
HMGCL-203ENST00000374490 CCDC144NLQ6NUI1 221 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 RBPMS2Q6ZRY4 209 aaKnown RBP11.03□□□□□ -0.64
HMGCL-203ENST00000374490 C1orf122Q6ZSJ8 110 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 KIR3DL3Q8N743 410 aa11.03□□□□□ -0.64
HMGCL-203ENST00000374490 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
HMGCL-203ENST00000374490 NPIPB5A8MRT5 1133 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 HSBP1O75506 76 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 SCGB2A1O75556 95 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 GDF5OSQ5U4N7 250 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 NIT1Q86X76 327 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 Q8N976 141 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 TMEM75Q8N9X5 138 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 ZFP30Q9Y2G7 519 aa11.02□□□□□ -0.64
HMGCL-203ENST00000374490 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.65
HMGCL-203ENST00000374490 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
HMGCL-203ENST00000374490 PMCHL1Q16048 86 aa11.02□□□□□ -0.65
HMGCL-203ENST00000374490 LEMD1Q68G75 181 aa11.02□□□□□ -0.65
HMGCL-203ENST00000374490 C11orf71Q6IPW1 123 aa11.02□□□□□ -0.65
HMGCL-203ENST00000374490 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-203ENST00000374490 GSX1Q9H4S2 264 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-203ENST00000374490 CD33P20138 364 aa11.01□□□□□ -0.65
HMGCL-203ENST00000374490 S100A7P31151 101 aa11.01□□□□□ -0.65
HMGCL-203ENST00000374490 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-203ENST00000374490 C5orf64Q2M2E5 130 aa11.01□□□□□ -0.65
HMGCL-203ENST00000374490 C16orf54Q6UWD8 224 aa11.01□□□□□ -0.65
HMGCL-203ENST00000374490 PAM16Q9Y3D7 125 aa11.01□□□□□ -0.65
HMGCL-203ENST00000374490 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
HMGCL-203ENST00000374490 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 HLA-DRB1P01911 266 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 C3orf79P0CE67 100 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 CAMPP49913 170 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 MFAP4P55083 255 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 KRTAP10-9P60411 292 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 ARF6P62330 175 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 MINOS1Q5TGZ0 78 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 TCF24Q7RTU0 167 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 IGFBPL1Q8WX77 278 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 RNF125Q96EQ8 232 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 MINOS1-NBL1R4GNA1 71 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 APCP25054 2843 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms