RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 NPIPB5A8MRT5 1133 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 ID1P41134 155 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 AAED1Q7RTV5 226 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 OR9G1Q8NH87 305 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 TMEM140Q9NV12 185 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 A0A087WX48 190 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 WI2-2373I1.2A0A1W2PRP0 233 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 P01737 135 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 IGHV3-9P01782 118 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 HOXA4Q00056 320 aaPredicted RBP7.67□□□□□ -1.18
SF3A3-201ENST00000373019 CARD19Q96LW7 228 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 TMEM133Q9H2Q1 129 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 PROK2Q9HC23 129 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 PTPRQQ9UMZ3 2332 aa7.67□□□□□ -1.18
SF3A3-201ENST00000373019 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 J3QT63 122 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 FSTL3O95633 263 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 CT45A10P0DMU9 189 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 CFHR1Q03591 330 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 Q71RC1 249 aaPredicted RBP7.66□□□□□ -1.18
SF3A3-201ENST00000373019 ZNF414Q96IQ9 312 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 RAX2Q96IS3 184 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 HARBI1Q96MB7 349 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 C10orf142B7Z368 130 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 OR1C1Q15619 314 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 HES3Q5TGS1 186 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 FAM234AQ9H0X4 552 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 OOEPA6NGQ2 149 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 C15orf61A6NNL5 157 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 FXYD5Q96DB9 178 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 COQ2Q96H96 371 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 EPDR1Q9UM22 224 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 POLDIP2Q9Y2S7 368 aa7.66□□□□□ -1.18
SF3A3-201ENST00000373019 TNCP24821 2201 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 SRYQ05066 204 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 RRN3P1Q2M238 152 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 IGF2-ASQ6U949 168 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 Q6ZS92 163 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 RFESDQ8TAC1 157 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 ZNF492Q9P255 531 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 CFAP47Q6ZTR5 3102 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 A0A096LPE4 126 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 IGHV3-64DA0A0J9YX35 117 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 A0A1W2PPZ6 126 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 ARMS2P0C7Q2 107 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 C1orf229Q6ZS94 237 aaPredicted RBP7.65□□□□□ -1.18
SF3A3-201ENST00000373019 SCNM1Q9BWG6 230 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 MRPL32Q9BYC8 188 aaKnown RBP7.65□□□□□ -1.18
SF3A3-201ENST00000373019 TMEM14BQ9NUH8 114 aa7.65□□□□□ -1.18
SF3A3-201ENST00000373019 FAM208BQ5VWN6 2430 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 TMEM30CPA0ZSE6 113 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 ZFAND5O76080 213 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 TFF1P04155 84 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF766Q5HY98 468 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 ZFAND6Q6FIF0 208 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 PATE2Q6UY27 113 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 MOGAT3Q86VF5 341 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 OR5AN1Q8NGI8 311 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 PAXXQ9BUH6 204 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 ZMAT4Q9H898 229 aa7.65□□□□□ -1.19
SF3A3-201ENST00000373019 NDUFS7O75251 213 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 LIFP15018 202 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 MEOX1P50221 254 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3A3-201ENST00000373019 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 PTH2Q96A98 100 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 IFI27L1Q96BM0 104 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 IGLV3-12A0A075B6K2 115 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF785A8K8V0 405 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 SRD5A1P18405 259 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 FOXG1P55316 489 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-201ENST00000373019 HSPE1P61604 102 aaKnown RBP7.64□□□□□ -1.19
SF3A3-201ENST00000373019 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 RPL39P5Q59GN2 51 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 MORN3Q6PF18 240 aaPredicted RBP7.64□□□□□ -1.19
SF3A3-201ENST00000373019 YRDCQ86U90 279 aaKnown RBP7.64□□□□□ -1.19
SF3A3-201ENST00000373019 OR13A1Q8NGR1 328 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 PKD1L2Q7Z442 2459 aa7.64□□□□□ -1.19
SF3A3-201ENST00000373019 TLN1Q9Y490 2541 aaKnown RBP7.63□□□□□ -1.19
SF3A3-201ENST00000373019 IGHV1OR21-1A0A087WYE8 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 CCL3P10147 92 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 PRTN3P24158 256 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 PIP4P1Q86T03 277 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GGNQ86UU5 652 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 TEX29Q8N6K0 151 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-201ENST00000373019 MGAQ8IWI9 3026 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE12JA6NER3 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE7O76087 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE12FP0CL80 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE12GP0CL81 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE12IP0CL82 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 ATP5J2P56134 94 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 GAGE4Q13068 117 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms