RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 FABP4P15090 132 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 RHOGP84095 191 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 RPL19P84098 196 aaKnown RBP13.97□□□□□ -0.17
CTSA-204ENST00000372484 OR10D4PQ8NGN7 298 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 PIFOQ8TCI5 191 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 SMIM12Q96EX1 92 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 C17orf77Q96MU5 243 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 ZFHX3Q15911 3703 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 ANKRD17O75179 2603 aaKnown RBP13.97□□□□□ -0.17
CTSA-204ENST00000372484 SMIM27A0A1W2PRY6 76 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 SPINK4O60575 86 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 CA1P00915 261 aaPredicted RBP13.97□□□□□ -0.17
CTSA-204ENST00000372484 IER3P46695 156 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 DSCR9P59020 149 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 COA6Q5JTJ3 125 aaKnown RBP13.97□□□□□ -0.17
CTSA-204ENST00000372484 CHRDL1Q9BU40 450 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 MEGF9Q9H1U4 602 aa13.97□□□□□ -0.17
CTSA-204ENST00000372484 GATCO43716 136 aaKnown RBP13.96□□□□□ -0.17
CTSA-204ENST00000372484 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.17
CTSA-204ENST00000372484 NUDT11Q96G61 164 aa13.96□□□□□ -0.17
CTSA-204ENST00000372484 A1L4Q6 167 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 MRPS12O15235 138 aaKnown RBP13.96□□□□□ -0.18
CTSA-204ENST00000372484 LTAP01374 205 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 GPR183P32249 361 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 ADMP35318 185 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 SLC35B1P78383 322 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 KLK9Q2XQG4 91 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 ZNF502Q8TBZ5 544 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 MLST8Q9BVC4 326 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 NIT2Q9NQR4 276 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 KLK9Q9UKQ9 250 aa13.96□□□□□ -0.18
CTSA-204ENST00000372484 TRBV9A0A0B4J1U6 114 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 B4DSR2 109 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 FRMD6-AS1P0C7T7 363 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTSA-204ENST00000372484 GOLT1AQ6ZVE7 132 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 HIST1H2BLQ99880 126 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 MRPL18Q9H0U6 180 aaKnown RBP13.95□□□□□ -0.18
CTSA-204ENST00000372484 HIF1ANQ9NWT6 349 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 CSMD2Q7Z408 3487 aa13.95□□□□□ -0.18
CTSA-204ENST00000372484 SIGLEC15Q6ZMC9 328 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 LYPD1Q8N2G4 141 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 ZNF414Q96IQ9 312 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■■■□□ 17.5
CTSA-204ENST00000372484 TRAV8-1A0A0A6YYK1 113 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 IGHV3-35A0A0C4DH35 117 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 SNURFLB1AK76 121 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 AMY1AP04745 511 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 CLEC3BP05452 202 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 PAX1P15863 534 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 TMEM190Q8WZ59 177 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 MBD6Q96DN6 1003 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 MS4A10Q96PG2 267 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 GNB1LQ9BYB4 327 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 RABAC1Q9UI14 185 aa13.94□□□□□ -0.18
CTSA-204ENST00000372484 SOX21Q9Y651 276 aaPredicted RBP13.94□□□□□ -0.18
CTSA-204ENST00000372484 GRAMD2BQ96HH9 432 aa13.93□□□□□ -0.18
CTSA-204ENST00000372484 PACRGQ96M98 296 aaPredicted RBP13.93□□□□□ -0.18
CTSA-204ENST00000372484 PYY3Q5JQD4 70 aa13.93□□□□□ -0.18
CTSA-204ENST00000372484 Q86TA4 180 aa13.93□□□□□ -0.18
CTSA-204ENST00000372484 IZUMO1RA6ND01 250 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 BMPR1BO00238 502 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 SLC25A16P16260 332 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 PDE6HQ13956 83 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 MRPL54Q6P161 138 aaKnown RBP13.92□□□□□ -0.18
CTSA-204ENST00000372484 WDR73Q6P4I2 378 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 POLQO75417 2590 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 FBN2P35556 2912 aa13.92□□□□□ -0.18
CTSA-204ENST00000372484 IGHV3OR16-8A0A075B7F1 116 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 TRAV41A0A0B4J266 112 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 H3BUX3 64 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 IGLV2-11P01706 119 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 RPL7P18124 248 aaKnown RBP13.91□□□□□ -0.18
CTSA-204ENST00000372484 LY6EQ16553 131 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 C9orf152Q5JTZ5 239 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 PRNTQ86SH4 94 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 EEF1AKMT3Q96AZ1 226 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 GNB4Q9HAV0 340 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 NAT8BQ9UHF3 227 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 K7EQM0 130 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 AMBPP02760 352 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 MT-ND6P03923 174 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 RAB4BP61018 213 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 COX19Q49B96 90 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 CLEC19AQ6UXS0 136 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
CTSA-204ENST00000372484 CCDC140Q96MF4 163 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 AAMDCQ9H7C9 122 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 LINC00527Q9UJ94 153 aa13.91□□□□□ -0.18
CTSA-204ENST00000372484 TRAV20A0A0B4J274 112 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 S100A7P31151 101 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 TSKUQ8WUA8 353 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 USP9YO00507 2555 aaPredicted RBP13.9□□□□□ -0.18
CTSA-204ENST00000372484 TRBV7-1A0A0A6YYK4 115 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 GRIFINA4D1Z8 144 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 AVPP01185 164 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 GATA3P23771 443 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 TMEM136Q6ZRR5 245 aa13.9□□□□□ -0.18
CTSA-204ENST00000372484 TMEM75Q8N9X5 138 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms