RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 TRGV1A0A0A0MS02 117 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 PHLDA1Q8WV24 401 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 GNLYP22749 145 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 AMN1Q8IY45 258 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 CSTL1Q9H114 145 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 TMEM158Q8WZ71 300 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 TRAV1-1A0A0B4J248 108 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 B3GALT5-AS1P59052 145 aa19.5■□□□□ 0.71
RAPGEF1-203ENST00000372195 HIST1H4AP62805 103 aaKnown RBP19.49■□□□□ 0.71
RAPGEF1-203ENST00000372195 S100A7L2Q5SY68 101 aa19.49■□□□□ 0.71
RAPGEF1-203ENST00000372195 ASPHD1Q5U4P2 390 aa19.49■□□□□ 0.71
RAPGEF1-203ENST00000372195 TNFRSF14Q92956 283 aa19.49■□□□□ 0.71
RAPGEF1-203ENST00000372195 LTBP1Q14766 1721 aa19.49■□□□□ 0.71
RAPGEF1-203ENST00000372195 WDR90Q96KV7 1748 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 EREGO14944 169 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 LURAP1LQ8IV03 231 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 SDK2Q58EX2 2172 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 ZNF318Q5VUA4 2279 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 OCIAD2Q56VL3 154 aa19.48■□□□□ 0.71
RAPGEF1-203ENST00000372195 KIR3DS1Q14943 382 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 ATXN8Q156A1 80 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 SPOCK3Q9BQ16 436 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 C9JQL5 133 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 C8orf49Q96NF6 230 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 GGTLC3B5MD39 225 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 FAM90A2PQ658T7 463 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 SIGLEC9Q9Y336 463 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 SYS1-DBNDD2H3BUS1 97 aa19.47■□□□□ 0.71
RAPGEF1-203ENST00000372195 WISP1O95388 367 aa19.46■□□□□ 0.71
RAPGEF1-203ENST00000372195 ZFAND6Q6FIF0 208 aa19.46■□□□□ 0.71
RAPGEF1-203ENST00000372195 VGLL1Q99990 258 aa19.46■□□□□ 0.71
RAPGEF1-203ENST00000372195 C5orf64Q2M2E5 130 aa19.45■□□□□ 0.7
RAPGEF1-203ENST00000372195 RUSC1-AS1Q66K80 236 aa19.45■□□□□ 0.7
RAPGEF1-203ENST00000372195 ZNF625Q96I27 306 aaPredicted RBP19.45■□□□□ 0.7
RAPGEF1-203ENST00000372195 CST9LQ9H4G1 147 aa19.45■□□□□ 0.7
RAPGEF1-203ENST00000372195 MDS2Q8NDY4 140 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 PAX4O43316 350 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 ESDP10768 282 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 RNASE2P10153 161 aaKnown RBP19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 FHL1Q13642 323 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 PTPRDP23468 1912 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 EFNA4P52798 201 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 STPG4Q8N801 248 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 FER1L5A0AVI2 2057 aa19.44■□□□□ 0.7
RAPGEF1-203ENST00000372195 GAGE2BQ13066 116 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 GAGE2EQ4V326 116 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 GAGE2DQ9UEU5 116 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 TEX43Q6ZNM6 134 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 DPH3P1Q9H4G8 78 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 RPRMLQ8N4K4 120 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 LINC00477Q96M19 166 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 PRADC1Q9BSG0 188 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 SPXQ9BT56 116 aa19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 C17orf82Q86X59 251 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 POLR3KQ9Y2Y1 108 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF1-203ENST00000372195 TRBV7-1A0A0A6YYK4 115 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 PIP4P2Q8N4L2 257 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 TMEM213A2RRL7 107 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 ZNF48Q96MX3 618 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 CSRP1P21291 193 aaKnown RBP19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 IGKV1-6A0A0C4DH72 117 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 TMEM238C9JI98 176 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 TOMM40O96008 361 aa19.41■□□□□ 0.7
RAPGEF1-203ENST00000372195 TRAV8-3A0A0A6YYJ7 113 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 TRAV13-1A0A0B4J241 112 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 NDUFS8O00217 210 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 MST1LQ2TV78 715 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 UBE2V1Q13404 147 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 C1orf159Q96HA4 380 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 CYYR1Q96J86 154 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 TNFRSF6BO95407 300 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 TMEM86BQ8N661 226 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 SMPXQ9UHP9 88 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 LYL1P12980 280 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 SPSB3Q6PJ21 355 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 DUX4L9Q6RFH8 374 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 ASCL4Q6XD76 172 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 C2orf82Q6UX34 121 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 MAPK1IP1LQ8NDC0 245 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 MED12Q93074 2177 aa19.4■□□□□ 0.7
RAPGEF1-203ENST00000372195 ARMS2P0C7Q2 107 aa19.39■□□□□ 0.7
RAPGEF1-203ENST00000372195 MORN3Q6PF18 240 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF1-203ENST00000372195 Q86TA4 180 aa19.39■□□□□ 0.69
RAPGEF1-203ENST00000372195 RASL11AQ6T310 242 aa19.39■□□□□ 0.69
RAPGEF1-203ENST00000372195 DKK1O94907 266 aa19.39■□□□□ 0.69
RAPGEF1-203ENST00000372195 CFHR2P36980 270 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 PRR30Q53SZ7 412 aaPredicted RBP19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 KLHL30-AS1Q8NEE0 82 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 JPT2Q9H910 190 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 CFHR3Q02985 330 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 RTTNQ86VV8 2226 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 ADAMTSL5Q6ZMM2 481 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 EDA2RQ9HAV5 297 aa19.38■□□□□ 0.69
RAPGEF1-203ENST00000372195 TRBV6-6A0A0A6YYG2 114 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 PHF3Q92576 2039 aaKnown RBP19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 KNCNA6PVL3 124 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 BPESC1Q9GZL8 116 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 FAM186AA6NE01 2351 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 A0A087WX48 190 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 GAGE12BA1L429 117 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms