RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 TRBV7-1A0A0A6YYK4 115 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 M0R036 132 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 GATCO43716 136 aaKnown RBP10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 CRYBA1P05813 215 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 RPL15P61313 204 aaKnown RBP10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 OR5B12Q96R08 314 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
HMGCS2-201ENST00000369406 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 ZNF207O43670 478 aaKnown RBP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 IGHG4P01861 327 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 APOHP02749 345 aaPredicted RBP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 SMIM7Q9BQ49 75 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 AURKAIP1Q9NWT8 199 aaPredicted RBP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 ZNF727A8MUV8 499 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 H3BUA1 57 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 RPLP1P05386 114 aaKnown RBP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 S100A9P06702 114 aaKnown RBP10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 MYCNOSP40205 109 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 UNQ9165/PRO28630Q6UXU0 137 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 NPFFR1Q9GZQ6 430 aa10.86□□□□□ -0.67
HMGCS2-201ENST00000369406 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 FAM181BA6NEQ2 426 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 SLC17A3O00476 420 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 CRYBB3P26998 211 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 TAGLN2P37802 199 aaKnown RBP10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 SNRPEP62304 92 aaKnown RBP10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 SUMO1P63165 101 aaKnown RBP10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 GNG5P63218 68 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 SDF2L1Q9HCN8 221 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 IGHV3-49A0A0A0MS15 119 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 PDE6DO43924 150 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 IGLC2P0DOY2 106 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 RANP62826 216 aaKnown RBP10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 Q8N2B8 174 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 OR4X2Q8NGF9 303 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 NIPSNAP3BQ9BS92 247 aa10.85□□□□□ -0.67
HMGCS2-201ENST00000369406 A0A1W2PRE2 83 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 BMPR1BO00238 502 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 ARL3P36405 182 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 C11orf52Q96A22 123 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 LINC00479Q96M42 142 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 RPS10P5Q9NQ39 176 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 TMEM14CQ9P0S9 112 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 BTF3P20290 206 aaKnown RBP10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 EDN2P20800 178 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 TVP23CQ96ET8 276 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 ARL2-SNX15V9GYD0 113 aa10.84□□□□□ -0.67
HMGCS2-201ENST00000369406 F6UZH7 168 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 S100A8P05109 93 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 RPL23P62829 140 aaKnown RBP10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 Q6ZSV7 163 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 C18orf65Q6ZTR6 163 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 F8P00451 2351 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 S100PP25815 95 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 SSTP61278 116 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 EXOC3-AS1Q8N2X6 119 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 RABAC1Q9UI14 185 aa10.83□□□□□ -0.68
HMGCS2-201ENST00000369406 HNF1AP20823 631 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 TEX29Q8N6K0 151 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 STXBP6Q8NFX7 210 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 ISOC2Q96AB3 205 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 Q9H3A6 140 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
HMGCS2-201ENST00000369406 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
HMGCS2-201ENST00000369406 HIST1H1EP10412 219 aaKnown RBP10.81□□□□□ -0.68
HMGCS2-201ENST00000369406 ADIRFQ15847 76 aa10.81□□□□□ -0.68
HMGCS2-201ENST00000369406 TMEM241Q24JQ0 296 aa10.81□□□□□ -0.68
HMGCS2-201ENST00000369406 TXNDC17Q9BRA2 123 aa10.81□□□□□ -0.68
HMGCS2-201ENST00000369406 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 SRSF2Q01130 221 aaKnown RBP10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 SGK494Q96LW2 274 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 GAR1Q9NY12 217 aaKnown RBP10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 PGPA6NDG6 321 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 CYSRT1A8MQ03 144 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 K7EN84 100 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 BUB3O43684 328 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 RHEBQ15382 184 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 IGFL4Q6B9Z1 124 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 SIGLEC15Q6ZMC9 328 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 BPIFA4PQ86YQ2 179 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 ATP6V0BQ99437 205 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 U3KQE9 123 aa10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 TEP1Q99973 2627 aaKnown RBP10.8□□□□□ -0.68
HMGCS2-201ENST00000369406 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 RAB5BP61020 215 aa10.79□□□□□ -0.68
HMGCS2-201ENST00000369406 TMEM160Q9NX00 188 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms