RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PSMB3P49720 205 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 CCL20P78556 96 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 KHDC3LQ587J8 217 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 RBMS3Q6XE24 437 aaKnown RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 TMEM219Q86XT9 240 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 OR5R1Q8NH85 324 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 ZNF48Q96MX3 618 aaPredicted RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 MRPL32Q9BYC8 188 aaKnown RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 IGKV1D-37A0A075B6S9 117 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 F8W036 122 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 K7EIM0 57 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 NDUFS6O75380 124 aaKnown RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 CXorf1O96002 111 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 HSPB1P04792 205 aaKnown RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 FABP1P07148 127 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 OR5G3P0C626 314 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 SFTA3P0C7M3 94 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 STAG3L2P0CL84 134 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 STAG3L3P0CL85 134 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 BCL2P10415 239 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 CDX1P47902 265 aaPredicted RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 FGF8P55075 233 aaPredicted RBP6.8□□□□□ -1.32
TPM3-213ENST00000368545 KLK9Q2XQG4 91 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 C19orf35Q6ZS72 473 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 OR1L4Q8NGR5 311 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 GATAD1Q8WUU5 269 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 TNFRSF19Q9NS68 423 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 KLK9Q9UKQ9 250 aa6.8□□□□□ -1.32
TPM3-213ENST00000368545 TRAV30A0A087WSZ9 112 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 CLN5O75503 358 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 IER3P46695 156 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 TAS2R45P59539 299 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 GCSAMLQ5JQS6 135 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 C10orf91Q5T1B1 145 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 SLC35B3Q9H1N7 401 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 KLK15Q9H2R5 256 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 MRPL36Q9P0J6 103 aaKnown RBP6.79□□□□□ -1.32
TPM3-213ENST00000368545 FUT9Q9Y231 359 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 CARHSP1Q9Y2V2 147 aaKnown RBP6.79□□□□□ -1.32
TPM3-213ENST00000368545 IGHV3-48P01763 117 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 HAGHQ16775 308 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 ECSCRQ19T08 205 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 DEFB112Q30KQ8 113 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 PAPPA-AS1Q5QFB9 102 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 FAM78BQ5VT40 261 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 SLC35E3Q7Z769 313 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 SVBPQ8N300 66 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 VAX2Q9UIW0 290 aa6.79□□□□□ -1.32
TPM3-213ENST00000368545 PSMB11A5LHX3 300 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 HMGB3O15347 200 aaKnown RBP6.78□□□□□ -1.32
TPM3-213ENST00000368545 COX7A2P2O60397 106 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 IGHG2P01859 326 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 APOC3P02656 99 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 IGF1P05019 195 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 IGLC1P0CG04 106 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 ADCYAP1P18509 176 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 ZNF90Q03938 601 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 LY6EQ16553 131 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 RARRES2Q99969 163 aa6.78□□□□□ -1.32
TPM3-213ENST00000368545 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
TPM3-213ENST00000368545 IGHV3-21A0A0B4J1V1 117 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 ARL14EPLP0DKL9 152 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 GATA2P23769 480 aaPredicted RBP6.77□□□□□ -1.33
TPM3-213ENST00000368545 FCGR2BP31994 310 aaPredicted RBP6.77□□□□□ -1.33
TPM3-213ENST00000368545 PLP1P60201 277 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 SUMO4Q6EEV6 95 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 OR5T1Q8NG75 326 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 VN1R17PQ8TDU5 208 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 RXFP4Q8TDU9 374 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 ASCL2Q99929 193 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 TXNDC17Q9BRA2 123 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 ZNF580Q9UK33 172 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
TPM3-213ENST00000368545 ARL2-SNX15V9GYD0 113 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 ABCA1O95477 2261 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 TRBV9A0A0B4J1U6 114 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 TRAV41A0A0B4J266 112 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 MDFIC2A0A1B0GVS7 189 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 C9JQL5 133 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 H3BUA1 57 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 GNG7O60262 68 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 MEF2BQ02080 365 aaPredicted RBP6.77□□□□□ -1.33
TPM3-213ENST00000368545 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 TMEM167BQ9NRX6 74 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 C21orf62Q9NYP8 219 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 VPREB3Q9UKI3 123 aa6.77□□□□□ -1.33
TPM3-213ENST00000368545 MAP1AP78559 2803 aaPredicted RBP6.76□□□□□ -1.33
TPM3-213ENST00000368545 MEGF8Q7Z7M0 2845 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 OR2J3O76001 311 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 SNAPINO95295 136 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 BRI3O95415 125 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 TOMM40O96008 361 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 IGHV4-59P01825 116 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 SRP19P09132 144 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms