RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PRR27Q6MZM9 219 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 Q6ZWC4 215 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 COX8CQ7Z4L0 72 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 CIARTQ8N365 385 aaPredicted RBP8.07□□□□□ -1.12
TPM3-209ENST00000368527 KLHDC1Q8N7A1 406 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 GATD1Q8NB37 220 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 SIRPDQ9H106 197 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
TPM3-209ENST00000368527 PTPRQQ9UMZ3 2332 aa8.07□□□□□ -1.12
TPM3-209ENST00000368527 A0A1W2PS18 150 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 M0R143 59 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 NUPR1O60356 82 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 HSBP1O75506 76 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 OR5AL1P0C617 328 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 CT45A10P0DMU9 189 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
TPM3-209ENST00000368527 PSG3Q16557 428 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 Q56UQ5 140 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 SIGLEC15Q6ZMC9 328 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
TPM3-209ENST00000368527 C18orf32Q8TCD1 76 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 ZNF414Q96IQ9 312 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 FANCD2OSQ96PS1 177 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 MIEN1Q9BRT3 115 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 ALKBH7Q9BT30 221 aaPredicted RBP8.06□□□□□ -1.12
TPM3-209ENST00000368527 NDFIP1Q9BT67 221 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 PRORYQ9H606 182 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 RPH3ALQ9UNE2 315 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 USP24Q9UPU5 2620 aa8.06□□□□□ -1.12
TPM3-209ENST00000368527 MALRD1Q5VYJ5 2156 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 AKAP13Q12802 2813 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 IGHV3-21A0A0B4J1V1 117 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 NCBP2LA6PVI3 153 aaKnown RBP8.05□□□□□ -1.12
TPM3-209ENST00000368527 DIRC3C9JPN6 131 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 CHEK1O14757 476 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 MRPS12O15235 138 aaKnown RBP8.05□□□□□ -1.12
TPM3-209ENST00000368527 SPINK4O60575 86 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 TOX4O94842 621 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 APELAP0DMC3 54 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 SRSF2Q01130 221 aaKnown RBP8.05□□□□□ -1.12
TPM3-209ENST00000368527 SLAQ13239 276 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 LDLRAD2Q5SZI1 272 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 FAM168AQ92567 244 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 CLEC5AQ9NY25 188 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 RABAC1Q9UI14 185 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 PSG8Q9UQ74 426 aa8.05□□□□□ -1.12
TPM3-209ENST00000368527 TLN1Q9Y490 2541 aaKnown RBP8.05□□□□□ -1.12
TPM3-209ENST00000368527 A0A1B0GUS0 222 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 A0A1B0GUT8 65 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 CA1P00915 261 aaPredicted RBP8.04□□□□□ -1.12
TPM3-209ENST00000368527 IGLV2-11P01706 119 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 SLC35B1P78383 322 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 KLRD1Q13241 179 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 RUSC1-AS1Q66K80 236 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 LHFPL4Q7Z7J7 247 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 PRNTQ86SH4 94 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 OR2D3Q8NGH3 330 aa8.04□□□□□ -1.12
TPM3-209ENST00000368527 FRYQ5TBA9 3013 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 PKDREJQ9NTG1 2253 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.03□□□□□ -1.12
TPM3-209ENST00000368527 A0A1W2PRD5 423 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 A0A1W2PRF3 423 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 A0A1W2PRM7 423 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 TMEM8BA6NDV4 472 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 BMI1P35226 326 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 KRTDAPP60985 99 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 KIAA1644Q3SXP7 199 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 ASPHD1Q5U4P2 390 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 LEMD1Q68G75 181 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 GSX1Q9H4S2 264 aaPredicted RBP8.03□□□□□ -1.12
TPM3-209ENST00000368527 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 FBXL7Q9UJT9 491 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 DSPP15924 2871 aaKnown RBP8.03□□□□□ -1.12
TPM3-209ENST00000368527 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
TPM3-209ENST00000368527 A0A087X0K7 114 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 LOC102724200A0A096LPH7 203 aaPredicted RBP8.02□□□□□ -1.13
TPM3-209ENST00000368527 TRBV7-1A0A0A6YYK4 115 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 IGHV7-81A0A0B4J1V7 117 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 M0R2Z0 102 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 NDUFS8O00217 210 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 FRMD6-AS1P0C7T7 363 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.13
TPM3-209ENST00000368527 CAMPP49913 170 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 DLX1P56177 255 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 CDSNQ15517 529 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 TCF24Q7RTU0 167 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 EXOC3-AS1Q8N2X6 119 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 LINC00469Q8N7U9 141 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 Q8N9W7 124 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 ITLN2Q8WWU7 325 aaPredicted RBP8.02□□□□□ -1.13
TPM3-209ENST00000368527 MRPL53Q96EL3 112 aaKnown RBP8.02□□□□□ -1.13
TPM3-209ENST00000368527 PGLYRP4Q96LB8 373 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 ROS1P08922 2347 aa8.02□□□□□ -1.13
TPM3-209ENST00000368527 ZFYVE26Q68DK2 2539 aa8.01□□□□□ -1.13
TPM3-209ENST00000368527 IGF2RP11717 2491 aa8.01□□□□□ -1.13
TPM3-209ENST00000368527 RBAKDNA6NC62 111 aa8.01□□□□□ -1.13
TPM3-209ENST00000368527 SH2D7A6NKC9 451 aaPredicted RBP8.01□□□□□ -1.13
TPM3-209ENST00000368527 OVOL3O00110 214 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms