RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
PTPRK-205ENST00000368213 CDX1P47902 265 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-205ENST00000368213 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 PRO1933Q9H354 126 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 NCOR1P1Q9H4R4 102 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 ATP5LO75964 103 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 NMBP08949 121 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 IL36BQ9NZH7 164 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-205ENST00000368213 CD28P10747 220 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 HOXA5P20719 270 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 MTURNQ8N3F0 131 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 C12orf57Q99622 126 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 GGTLC1Q9BX51 225 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 PLXNA2O75051 1894 aa8.65□□□□□ -1.02
PTPRK-205ENST00000368213 HIGD1CA8MV81 97 aa8.65□□□□□ -1.03
PTPRK-205ENST00000368213 LDLRAD4O15165 306 aa8.65□□□□□ -1.03
PTPRK-205ENST00000368213 DNLZQ5SXM8 178 aa8.65□□□□□ -1.03
PTPRK-205ENST00000368213 PHF3Q92576 2039 aaKnown RBP8.64□□□□□ -1.03
PTPRK-205ENST00000368213 TGIF2-C20orf24A0A0A6YYL0 155 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 F2Z2F3 143 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 PSG3Q16557 428 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 KIF26AQ9ULI4 1882 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-205ENST00000368213 UTRNP46939 3433 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 RNASE2P10153 161 aaKnown RBP8.64□□□□□ -1.03
PTPRK-205ENST00000368213 CFHR3Q02985 330 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 SRSF4Q08170 494 aaKnown RBP8.64□□□□□ -1.03
PTPRK-205ENST00000368213 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 LINC00311Q8N616 119 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 PAM16Q9Y3D7 125 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 WNK2Q9Y3S1 2297 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 PLXND1Q9Y4D7 1925 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 TRGC2P03986 189 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 CCL20P78556 96 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 RFNGQ9Y644 331 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 CBLN1P23435 193 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 FHL1Q13642 323 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 CADP27708 2225 aa8.64□□□□□ -1.03
PTPRK-205ENST00000368213 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-205ENST00000368213 OR11H2Q8NH07 326 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 FOLR2P14207 255 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-205ENST00000368213 NDUFA4O00483 81 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 Q6ZS49 121 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 Q8TAT8 98 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 ZNF524Q96C55 264 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 RNASE7Q9H1E1 156 aaKnown RBP8.63□□□□□ -1.03
PTPRK-205ENST00000368213 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-205ENST00000368213 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 FOXC2Q99958 501 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 C8orf86Q6ZUL3 223 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 LHFPL1Q86WI0 220 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 MGST2Q99735 147 aa8.63□□□□□ -1.03
PTPRK-205ENST00000368213 MRPL27Q9P0M9 148 aaKnown RBP8.63□□□□□ -1.03
PTPRK-205ENST00000368213 SPATA31B1PQ5VZV4 182 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 TMEM190Q8WZ59 177 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
PTPRK-205ENST00000368213 JKAMPQ9P055 326 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 ADAMTS9Q9P2N4 1935 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 C2orf16Q68DN1 1984 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 IZUMO1RA6ND01 250 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 CKS1BP61024 79 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 CTSZQ9UBR2 303 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 LTBP2Q14767 1821 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 CUL9Q8IWT3 2517 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 DNAL4O96015 105 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 ZNF876PQ49A33 203 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 HIST2H2BCQ6DN03 193 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
PTPRK-205ENST00000368213 QRFPP83859 136 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 HELZP42694 1942 aaKnown RBP8.62□□□□□ -1.03
PTPRK-205ENST00000368213 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
PTPRK-205ENST00000368213 RPLP1P05386 114 aaKnown RBP8.61□□□□□ -1.03
PTPRK-205ENST00000368213 SDHCQ99643 169 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-205ENST00000368213 MLANAQ16655 118 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 DEFB136Q30KP8 78 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 OR5A1Q8NGJ0 315 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 CGB3P0DN86 165 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 MMP23AO75900 390 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 EVI2AP22794 236 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 SRSF1Q07955 248 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPRK-205ENST00000368213 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 RNF126Q9BV68 326 aa8.61□□□□□ -1.03
PTPRK-205ENST00000368213 RBMY1BA6NDE4 496 aaKnown RBP8.6□□□□□ -1.03
PTPRK-205ENST00000368213 RBMY1EA6NEQ0 496 aaKnown RBP8.6□□□□□ -1.03
PTPRK-205ENST00000368213 H3BUA1 57 aa8.6□□□□□ -1.03
PTPRK-205ENST00000368213 RBMY1DP0C7P1 496 aaKnown RBP8.6□□□□□ -1.03
PTPRK-205ENST00000368213 RBMY1A1P0DJD3 496 aaKnown RBP8.6□□□□□ -1.03
PTPRK-205ENST00000368213 RBMY1CP0DJD4 496 aa8.6□□□□□ -1.03
PTPRK-205ENST00000368213 ERASQ7Z444 233 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms