RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 IGHV3OR15-7A0A075B7D8 119 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 LOC107984640A0A0U1RRK4 108 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 LAMB4A4D0S4 1761 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 SPRY2O43597 315 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ABHD12Q8N2K0 398 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 PRSS27Q9BQR3 290 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TTC28Q96AY4 2481 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 LAMTOR5O43504 91 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 BRI3O95415 125 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF441Q8N8Z8 693 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 SIGLEC9Q9Y336 463 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 TNFRSF6BO95407 300 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 HILPDAQ9Y5L2 63 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 LOC102723996A0A087X1L8 192 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 WIPF1O43516 503 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 JMJD8Q96S16 334 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ADARB2-AS1A8MUL3 147 aa3.08□□□□□ -1.92
SYNE1-207ENST00000367255 ODF1Q14990 250 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 FAM201AQ5SY85 155 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 SNHG12Q9BXW3 62 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 BEX4Q9NWD9 120 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 RICTORQ6R327 1708 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 CNOT1A5YKK6 2376 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 LOC107984156A0A0G2JMH3 177 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 ARL17AQ8IVW1 177 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 RASL10AQ92737 203 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 H3BUT2 72 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 K7ENP7 123 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 LHFPL6Q9Y693 200 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 TRAV13-1A0A0B4J241 112 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 NDUFA7O95182 113 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 LINC00467Q9BRT7 94 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 NAV2Q8IVL1 2488 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 PLA2G2FQ9BZM2 168 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 DDX60Q8IY21 1712 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 LINC00205P59089 165 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 H3BP45 60 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 BAALCQ8WXS3 180 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 PDCD11Q14690 1871 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 DAD1P61803 113 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 GUSBP1Q15486 140 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 ECM29Q5VYK3 1845 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 TGFBR3LH3BV60 316 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 IGF2-ASQ6U949 168 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 NAV3Q8IVL0 2385 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 PGPA6NDG6 321 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 ANK1P16157 1881 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 NANOS3P60323 173 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF793Q6ZN11 406 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 EEF1AKMT3Q96AZ1 226 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 EREGO14944 169 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 GLRXP35754 106 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 TRBV20OR9-2A0A075B6H5 130 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 GOLT1AQ6ZVE7 132 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 CYYR1Q96J86 154 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 RPL27AP46776 148 aaKnown RBP3.07□□□□□ -1.92
SYNE1-207ENST00000367255 COX17Q14061 63 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM167AQ8TBQ9 72 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 PKD1L3Q7Z443 1732 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 A0A1B0GUS0 222 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 CEND1Q8N111 149 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 TMEM256-PLSCR3K7ERE1 68 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 IGHG3P01860 377 aa3.07□□□□□ -1.92
SYNE1-207ENST00000367255 ZNF818PQ6ZRF7 136 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 A0A0G2JNJ9 132 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 KNCNA6PVL3 124 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 NKAPP1Q8N9T2 125 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 Q9UFV3 132 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 NDUFV3P56181 108 aaKnown RBP3.06□□□□□ -1.92
SYNE1-207ENST00000367255 UNQ6494/PRO21346Q6UXR6 183 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 STHQ8IWL8 128 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 C21orf62Q9NYP8 219 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 FER1L5A0AVI2 2057 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 A0A087WX48 190 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 TRBV10-2A0A0K0K1G8 114 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 PRR19A6NJB7 356 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 H0Y8X5 98 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 H3BPC8 53 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 A0A087X002 238 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 CRYBA2P53672 197 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 MLANAQ16655 118 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 TREML4Q6UXN2 200 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 PPIAL4EA0A075B759 164 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 PPIAL4FP0DN26 164 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 RPP25LQ8N5L8 163 aaKnown RBP3.06□□□□□ -1.92
SYNE1-207ENST00000367255 DAZ1Q9NQZ3 744 aaKnown RBP3.06□□□□□ -1.92
SYNE1-207ENST00000367255 PYGO1Q9Y3Y4 419 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 CD55P08174 381 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 C15orf32Q32M92 178 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 WNT10AQ9GZT5 417 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 DPH3P1Q9H4G8 78 aa3.06□□□□□ -1.92
SYNE1-207ENST00000367255 NDUFS7O75251 213 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms