RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 DMRTC2Q8IXT2 367 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-204ENST00000367248 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 TRBV7-1A0A0A6YYK4 115 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 F5H768 121 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 TMEM190Q8WZ59 177 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 SEPSECSQ9HD40 501 aaKnown RBP9.37□□□□□ -0.91
SYNE1-204ENST00000367248 DKK4Q9UBT3 224 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
SYNE1-204ENST00000367248 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 TSC2P49815 1807 aa9.37□□□□□ -0.91
SYNE1-204ENST00000367248 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
SYNE1-204ENST00000367248 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 HIGD1CA8MV81 97 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 IMMP2LQ96T52 175 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 IGHV4-59P01825 116 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 DEFB112Q30KQ8 113 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 A0A087WWC5 75 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 LOC107984156A0A0G2JMH3 177 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 DTX2Q86UW9 622 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 ARL17AQ8IVW1 177 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 EXOC3-AS1Q8N2X6 119 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 SRSF8Q9BRL6 282 aaKnown RBP9.36□□□□□ -0.91
SYNE1-204ENST00000367248 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 LINC01619G3V211 115 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 PGPEP1LA6NFU8 196 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 CDX1P47902 265 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-204ENST00000367248 KAAG1Q9UBP8 84 aa9.36□□□□□ -0.91
SYNE1-204ENST00000367248 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 A0A1W2PPI3 338 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-204ENST00000367248 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 LINC00311Q8N616 119 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 MGST2Q99735 147 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 TRAV1-1A0A0B4J248 108 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 APOHP02749 345 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-204ENST00000367248 TCRAP04437 139 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 FAM120AOSQ5T036 256 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 FOXC2Q99958 501 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 PRADC1Q9BSG0 188 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 TMEM50AO95807 157 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 VPS25Q9BRG1 176 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 IGHV4-61A0A0C4DH41 118 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 SHISA9B4DS77 424 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 MLANAQ16655 118 aa9.35□□□□□ -0.91
SYNE1-204ENST00000367248 EVI2AP22794 236 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 PKIAP61925 76 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 LURAP1LQ8IV03 231 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 ZMAT4Q9H898 229 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 IGLV3-1P01715 115 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 DEFB136Q30KP8 78 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 ANAPC10Q9UM13 185 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 J3QLI3 93 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 Q8TAT8 98 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 SCGB3A1Q96QR1 104 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
SYNE1-204ENST00000367248 TMEM95Q3KNT9 176 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 AGMATQ9BSE5 352 aa9.34□□□□□ -0.91
SYNE1-204ENST00000367248 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 DAZ1Q9NQZ3 744 aaKnown RBP9.33□□□□□ -0.92
SYNE1-204ENST00000367248 CIDEAO60543 219 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 CGB3P0DN86 165 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 TMEM249Q2WGJ8 235 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 SLC25A34Q6PIV7 304 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 HIST1H4GQ99525 98 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF25P17030 456 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-204ENST00000367248 SRSF3P84103 164 aaKnown RBP9.33□□□□□ -0.92
SYNE1-204ENST00000367248 ANKHD1Q8IWZ3 2542 aaKnown RBP9.33□□□□□ -0.92
SYNE1-204ENST00000367248 CA1P00915 261 aaPredicted RBP9.33□□□□□ -0.92
SYNE1-204ENST00000367248 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 A6NJY4 79 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 HIVEP2P31629 2446 aa9.33□□□□□ -0.92
SYNE1-204ENST00000367248 KNCNA6PVL3 124 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 ADARB2-AS1A8MUL3 147 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 ATP5LO75964 103 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
SYNE1-204ENST00000367248 ZNF833PQ6ZTB9 187 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 LCN12Q6JVE5 192 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 LRRK1Q38SD2 2015 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 A0A096LPF7 62 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 TOMM40O96008 361 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 PHLDA1Q8WV24 401 aaPredicted RBP9.32□□□□□ -0.92
SYNE1-204ENST00000367248 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 DAD1P61803 113 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 NLRC5Q86WI3 1866 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 MMP23AO75900 390 aa9.32□□□□□ -0.92
SYNE1-204ENST00000367248 GZMBP10144 247 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms