RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NPFFO15130 113 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 LILRA1O75019 489 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SAA2P0DJI9 122 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 DTX1Q86Y01 620 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 CNOT1A5YKK6 2376 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 NUP210LQ5VU65 1888 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE12JA6NER3 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SYS1-DBNDD2H3BUS1 97 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE7O76087 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 MOSP00540 346 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE12FP0CL80 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE12GP0CL81 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE12IP0CL82 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 EVI2AP22794 236 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GAGE4Q13068 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 DMRTC2Q8IXT2 367 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM167AQ8TBQ9 72 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 RNF5Q99942 180 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SPRY4Q9C004 299 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 MRPL27Q9P0M9 148 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 VWC2Q2TAL6 325 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 RABAC1Q9UI14 185 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SMAD7O15105 426 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 GFRA3O60609 400 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV1-39P01597 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV1D-39P04432 117 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 SUMO2P61956 95 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 FOXC1Q12948 553 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 POU2AF1Q16633 256 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 LINC01551Q86U37 167 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 C11orf1Q9H5F2 150 aa4.41□□□□□ -1.7
CDC42BPA-204ENST00000366767 CHAC1Q9BUX1 264 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV3-7A0A075B6H7 116 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 CEACAM8P31997 349 aaPredicted RBP4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 SRSF1Q07955 248 aaKnown RBP eCLIP4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 HS3ST6Q96QI5 342 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 METTL26Q96S19 204 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 PPDPFLQ8WWR9 84 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 CLEC7AQ9BXN2 247 aa4.4□□□□□ -1.7
CDC42BPA-204ENST00000366767 TCRBV4S1A1TA0A5B7 111 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV1-46P01743 117 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM27E3Q08E93 113 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF415Q09FC8 603 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 KLF17Q5JT82 389 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 GAGE2AQ6NT46 116 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 ABHD17AQ96GS6 310 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 REG1BP48304 166 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 S100A7L2Q5SY68 101 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 HCP5Q6MZN7 132 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGFL2Q6UWQ7 119 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 NEU4Q8WWR8 484 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 H3BMM0 161 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 NBEAP1P0C6P0 100 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF688P0C7X2 276 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 SAA1P0DJI8 122 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 LINC01559Q495D7 138 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 TSKUQ8WUA8 353 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 WFDC12Q8WWY7 111 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 UBE2WQ96B02 151 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 DCTN5Q9BTE1 182 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 LINC00473A8K010 186 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q6ZS92 163 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 WDR86Q86TI4 376 aa4.4□□□□□ -1.71
CDC42BPA-204ENST00000366767 USF3Q68DE3 2245 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 TRBV20-1A0A075B6N2 111 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF503-AS2A6NEH8 195 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 GATA4P43694 442 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 PPP1R27Q86WC6 154 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 LEAP2Q969E1 77 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 SRSF8Q9BRL6 282 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 C1QTNF4Q9BXJ3 329 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 A0A1W2PS18 150 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 C9JAW5 83 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 CNTFRP26992 372 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 ZNF726P1Q15940 193 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLC2P0DOY2 106 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 VDAC2P45880 294 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM216BQ8N7L0 139 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 Q8TCH9 128 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGKV1D-17A0A075B6S4 117 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGHV2-26A0A0B4J1V2 119 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 FBXL7Q9UJT9 491 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 GGTLC3B5MD39 225 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 CD33P20138 364 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 IGFL3Q6UXB1 125 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 SLC25A48Q6ZT89 311 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 MED13Q9UHV7 2174 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 A0A1W2PPM0 123 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 FAM90A27PA6NNH2 459 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 RHOGP84095 191 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 C5orf24Q7Z6I8 188 aa4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 MRPL20Q9BYC9 149 aaKnown RBP4.39□□□□□ -1.71
CDC42BPA-204ENST00000366767 PLA2G2EQ9NZK7 142 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms