RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 MYH10P35580 1976 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 LOC730098B7Z3J9 87 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 ERC2-IT1O76042 136 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 EIF3IQ13347 325 aaKnown RBP-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 WFDC2Q14508 124 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 ZNF56Q15929 161 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 SYCE1Q8N0S2 351 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 MAP1LC3AQ9H492 121 aa-2.46□□□□□ -2.8
RNU4-40P-201ENST00000364351 ANK3Q12955 4377 aaKnown RBP-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 CCDC168Q8NDH2 2452 aa-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 MED1Q15648 1581 aaPredicted RBP-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 CD79AP11912 226 aa-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 ANP32AP39687 249 aaKnown RBP-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 UCK1Q9HA47 277 aa-2.47□□□□□ -2.8
RNU4-40P-201ENST00000364351 LRRK2Q5S007 2527 aa-2.47□□□□□ -2.81
RNU4-40P-201ENST00000364351 NBEAL2Q6ZNJ1 2754 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 LOC100506127A0A0U1RQW1 187 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 EVPLLA8MZ36 301 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 OR2J2O76002 312 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 IVLP07476 585 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 RPL12P30050 165 aaKnown RBP-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 Q3ZCU0 254 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 XAF1Q6GPH4 301 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 OR5D14Q8NGL3 314 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 OR10AG1Q8NH19 301 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 NIPSNAP1Q9BPW8 284 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 LIMD2Q9BT23 127 aa-2.48□□□□□ -2.81
RNU4-40P-201ENST00000364351 RFX7Q2KHR2 1363 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 MTORP42345 2549 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 YPEL3P61236 119 aaPredicted RBP-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 SLAMF6Q96DU3 332 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 HIST1H2BLQ99880 126 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 CMTM6Q9NX76 183 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 PTPRDP23468 1912 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 ARHGEF11O15085 1522 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 AKAP9Q99996 3911 aa-2.49□□□□□ -2.81
RNU4-40P-201ENST00000364351 TMEM213A2RRL7 107 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 E7EUB6 86 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 EVI2AP22794 236 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 DSCR4P56555 118 aaPredicted RBP-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 OR5AS1Q8N127 324 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 SLC25A21Q9BQT8 299 aaPredicted RBP-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 PBOV1Q9GZY1 135 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 AGPAT3Q9NRZ7 376 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 ESPL1Q14674 2120 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 BIVM-ERCC5R4GMW8 1640 aa-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 PPRC1Q5VV67 1664 aaKnown RBP-2.5□□□□□ -2.81
RNU4-40P-201ENST00000364351 ITPR1Q14643 2758 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 A0A096LNT2 108 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 EXOC1LA0A1B0GW35 172 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 PDE6GP18545 87 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 AP2S1P53680 142 aaPredicted RBP-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 MALSU1Q96EH3 234 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 LINC00208Q96KT6 92 aa-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 CCDC94Q9BW85 323 aaPredicted RBP-2.51□□□□□ -2.81
RNU4-40P-201ENST00000364351 F5P12259 2224 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 A0A087X0T9 212 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 PMS2P3Q13401 168 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 Q5VSD8 79 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 LINC00299Q6ZSB3 139 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 SIKE1Q9BRV8 207 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 DCUN1D5Q9BTE7 237 aa-2.52□□□□□ -2.81
RNU4-40P-201ENST00000364351 URB1O60287 2271 aaKnown RBP-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 PRKDCP78527 4128 aaKnown RBP-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 A0A1W2PRS3 328 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 A6NN06 94 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 SSNA1O43805 119 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 SULT1C4O75897 302 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 PPIBP23284 216 aaKnown RBP-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 NAA20P61599 178 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 DYNLT1P63172 113 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 C8orf74Q6P047 294 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 Q8IZM0 81 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 GGACTQ9BVM4 153 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 PRTFDC1Q9NRG1 225 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 C3orf18Q9UK00 162 aa-2.53□□□□□ -2.81
RNU4-40P-201ENST00000364351 OBSL1O75147 1896 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 NBASA2RRP1 2371 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 MGAM2Q2M2H8 2515 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 M0R3E3 92 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 HLA-DRB1P01911 266 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 NMBP08949 121 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 MYL12AP19105 171 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 DEFA5Q01523 94 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 RIMBP3CA6NJZ7 1639 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 RIMBP3BA6NNM3 1639 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 RIMBP3Q9UFD9 1639 aa-2.54□□□□□ -2.82
RNU4-40P-201ENST00000364351 PFDN6O15212 129 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 ACACAQ13085 2346 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 PMAIP1Q13794 54 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 FUNDC1Q8IVP5 155 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 CYP4F30PQ9H0H9 118 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 PKD1P98161 4303 aa-2.55□□□□□ -2.82
RNU4-40P-201ENST00000364351 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 HECW1Q76N89 1606 aa-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 H7BYZ3 331 aa-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 K7EQZ3 153 aa-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 PSMD12O00232 456 aaPredicted RBP-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 CLVS2Q5SYC1 327 aa-2.56□□□□□ -2.82
RNU4-40P-201ENST00000364351 DNAJB3Q8WWF6 145 aa-2.56□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms