RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KIAA2026Q5HYC2 2103 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.91□□□□□ -0.66
LDB3-202ENST00000361373 AMBPP02760 352 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 CNTFRP26992 372 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
LDB3-202ENST00000361373 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 IGLV3-1P01715 115 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 DOCK7Q96N67 2140 aa10.91□□□□□ -0.66
LDB3-202ENST00000361373 GHRHP01286 108 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 LINC00614P0C842 121 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 SPATA31B1PQ5VZV4 182 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 LCN12Q6JVE5 192 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 Q96MF0 132 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 RSPO1Q2MKA7 263 aaPredicted RBP10.9□□□□□ -0.66
LDB3-202ENST00000361373 EXOC3-AS1Q8N2X6 119 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 IGKV2-40A0A087WW87 121 aaPredicted RBP10.9□□□□□ -0.66
LDB3-202ENST00000361373 SRRM4A7MD48 611 aaKnown RBP10.9□□□□□ -0.66
LDB3-202ENST00000361373 IGKV2D-40P01614 121 aaPredicted RBP10.9□□□□□ -0.66
LDB3-202ENST00000361373 Q6ZRM9 215 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 C3orf56Q8N813 242 aa10.9□□□□□ -0.66
LDB3-202ENST00000361373 INSP01308 110 aa10.9□□□□□ -0.67
LDB3-202ENST00000361373 CR1LQ2VPA4 569 aa10.9□□□□□ -0.67
LDB3-202ENST00000361373 RCHY1Q96PM5 261 aa10.9□□□□□ -0.67
LDB3-202ENST00000361373 NDUFA4L2Q9NRX3 87 aa10.9□□□□□ -0.67
LDB3-202ENST00000361373 PSG3Q16557 428 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 WDR86Q86TI4 376 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 DKK1O94907 266 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 C17orf58Q2M2W7 97 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 ZNF524Q96C55 264 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 C1orf194Q5T5A4 169 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 C5orf24Q7Z6I8 188 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 C8orf31Q8N9H6 132 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 RSPO3Q9BXY4 272 aaPredicted RBP10.89□□□□□ -0.67
LDB3-202ENST00000361373 ZNF503-AS2A6NEH8 195 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
LDB3-202ENST00000361373 WISP1O95388 367 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 RPL36AP83881 106 aaKnown RBP10.88□□□□□ -0.67
LDB3-202ENST00000361373 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 RPL36ALQ969Q0 106 aaKnown RBP10.88□□□□□ -0.67
LDB3-202ENST00000361373 SERF1AO75920 110 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 OVOL3O00110 214 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 ATP6V0E1O15342 81 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 MALP21145 153 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
LDB3-202ENST00000361373 CRPP02741 224 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 Q8NFD4 153 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 MPDZO75970 2070 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 TP53BP1Q12888 1972 aaPredicted RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 HEATR5AQ86XA9 2040 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 PGPEP1LA6NFU8 196 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 WT1P19544 449 aaPredicted RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 RUSC1-AS1Q66K80 236 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 SRSF3P84103 164 aaKnown RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 CHCHD5Q9BSY4 110 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 KLF2Q9Y5W3 355 aaPredicted RBP10.87□□□□□ -0.67
LDB3-202ENST00000361373 CADP27708 2225 aa10.87□□□□□ -0.67
LDB3-202ENST00000361373 FCN3O75636 299 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 DPM2O94777 84 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 ADMP35318 185 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 LINC00205P59089 165 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 C15orf65H3BRN8 121 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 NDPQ00604 133 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 ACTL10Q5JWF8 245 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 ATRAIDQ6UW56 229 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 DMRTC2Q8IXT2 367 aaPredicted RBP10.86□□□□□ -0.67
LDB3-202ENST00000361373 SYNJ2BPP57105 145 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 JKAMPQ9P055 326 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 FAM208BQ5VWN6 2430 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 LINC01619G3V211 115 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
LDB3-202ENST00000361373 OR9G4Q8NGQ1 327 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 A0A087WX48 190 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 RBMY1BA6NDE4 496 aaKnown RBP10.85□□□□□ -0.67
LDB3-202ENST00000361373 RBMY1EA6NEQ0 496 aaKnown RBP10.85□□□□□ -0.67
LDB3-202ENST00000361373 RBMY1DP0C7P1 496 aaKnown RBP10.85□□□□□ -0.67
LDB3-202ENST00000361373 RBMY1A1P0DJD3 496 aaKnown RBP10.85□□□□□ -0.67
LDB3-202ENST00000361373 RBMY1CP0DJD4 496 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 CD28P10747 220 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 SEC11AP67812 179 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 SPRY4Q9C004 299 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 GTF3C1Q12789 2109 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 SHISA9B4DS77 424 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 POU2AF1Q16633 256 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
LDB3-202ENST00000361373 ELANEP08246 267 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 H3BUA1 57 aa10.84□□□□□ -0.67
LDB3-202ENST00000361373 NDUFA4O00483 81 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms