RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 RNF114Q9Y508 228 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
CTR9-201ENST00000361367 A0A087WWC5 75 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
CTR9-201ENST00000361367 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 PRELID3AQ96N28 172 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
CTR9-201ENST00000361367 OSTCQ9NRP0 149 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 SMIM6P0DI80 62 aa11.14□□□□□ -0.63
CTR9-201ENST00000361367 NPIPB5A8MRT5 1133 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 PPP1R17O96001 155 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 SCGB1C2P0DMR2 95 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 HTN3P15516 51 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 SPOCK3Q9BQ16 436 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 PCNX3Q9H6A9 2034 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 A0A1B0GW15 77 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 WT1-ASQ06250 92 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTR9-201ENST00000361367 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 C3orf56Q8N813 242 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 GPR61Q9BZJ8 451 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 CMC4P56277 68 aaPredicted RBP11.13□□□□□ -0.63
CTR9-201ENST00000361367 TCTAP57738 103 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 MSMPQ1L6U9 139 aa11.13□□□□□ -0.63
CTR9-201ENST00000361367 TCRAP04437 139 aa11.12□□□□□ -0.63
CTR9-201ENST00000361367 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
CTR9-201ENST00000361367 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
CTR9-201ENST00000361367 LYPD6Q86Y78 171 aa11.12□□□□□ -0.63
CTR9-201ENST00000361367 PAX9P55771 341 aa11.12□□□□□ -0.63
CTR9-201ENST00000361367 PARD6GQ9BYG4 376 aaPredicted RBP11.12□□□□□ -0.63
CTR9-201ENST00000361367 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 NMUP48645 174 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 OR1N2Q8NGR9 330 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 CHD8Q9HCK8 2581 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 GUSBP1Q15486 140 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
CTR9-201ENST00000361367 DTX2Q86UW9 622 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 C10orf105Q8TEF2 133 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 TMEM190Q8WZ59 177 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 MED12LQ86YW9 2145 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 IGKV3OR2-268A0A0C4DH90 116 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 FCN3O75636 299 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 HOXB4P17483 251 aaPredicted RBP11.11□□□□□ -0.63
CTR9-201ENST00000361367 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 HIVEP3Q5T1R4 2406 aa11.11□□□□□ -0.63
CTR9-201ENST00000361367 M0R143 59 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 M0R3E3 92 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 SHANK2-AS3Q9BTD1 123 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 POU2AF1Q16633 256 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 FAM120AOSQ5T036 256 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 IGFL4Q6B9Z1 124 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 ORMDL3Q8N138 153 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 ZNF138P52744 262 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 YPEL3P61236 119 aaPredicted RBP11.1□□□□□ -0.63
CTR9-201ENST00000361367 DEFB112Q30KQ8 113 aa11.1□□□□□ -0.63
CTR9-201ENST00000361367 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 HOXA3O43365 443 aaPredicted RBP11.09□□□□□ -0.63
CTR9-201ENST00000361367 OR11H6Q8NGC7 330 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 CA1P00915 261 aaPredicted RBP11.09□□□□□ -0.63
CTR9-201ENST00000361367 LCN12Q6JVE5 192 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 DERL1Q9BUN8 251 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 FOLR2P14207 255 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 ABCA2Q9BZC7 2435 aa11.09□□□□□ -0.63
CTR9-201ENST00000361367 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 Q8TAT8 98 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 TRAV8-1A0A0A6YYK1 113 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 IGHV4-59P01825 116 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
CTR9-201ENST00000361367 MIEN1Q9BRT3 115 aa11.08□□□□□ -0.64
CTR9-201ENST00000361367 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 NUDT10Q8NFP7 164 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 TSKUQ8WUA8 353 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 NUDT11Q96G61 164 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 SSBP4Q9BWG4 385 aaPredicted RBP11.07□□□□□ -0.64
CTR9-201ENST00000361367 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
CTR9-201ENST00000361367 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 A0A087X0M5 115 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 A0A1B0GX30 115 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 CDX1P47902 265 aaPredicted RBP11.07□□□□□ -0.64
CTR9-201ENST00000361367 LINC00477Q96M19 166 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 ZNF256Q9Y2P7 627 aaPredicted RBP11.07□□□□□ -0.64
CTR9-201ENST00000361367 A0A1B0GW64 132 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 H3BVH4 76 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
CTR9-201ENST00000361367 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
CTR9-201ENST00000361367 TCF23Q7RTU1 214 aa11.06□□□□□ -0.64
CTR9-201ENST00000361367 NAV3Q8IVL0 2385 aa11.06□□□□□ -0.64
CTR9-201ENST00000361367 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms