RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 ZNF503Q96F45 646 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 CHRDL1Q9BU40 450 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 HEYLQ9NQ87 328 aaPredicted RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 ITPR3Q14573 2671 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 C7orf71A4D174 169 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 GAGE10A6NGK3 116 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 C12orf77C9JDV5 145 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 VDAC2P45880 294 aaPredicted RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 GNG3P63215 75 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 SSBP2P81877 361 aaPredicted RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 HOXA4Q00056 320 aaPredicted RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 CCDC144NLQ6NUI1 221 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 C5orf17Q8NAS9 161 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 NUP35Q8NFH5 326 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
CCL28-201ENST00000361115 LINC00479Q96M42 142 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 SAP30LQ9HAJ7 183 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 GCM1Q9NP62 436 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 TNCP24821 2201 aa6.2□□□□□ -1.42
CCL28-201ENST00000361115 IGHV3-43A0A0B4J1X8 118 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 TRAV3A0A0B4J244 114 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 CRXO43186 299 aaPredicted RBP6.19□□□□□ -1.42
CCL28-201ENST00000361115 ADH4P08319 380 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 IGHV3-43DP0DP04 118 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 CAMPP49913 170 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 WDR86Q86TI4 376 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 VKORC1L1Q8N0U8 176 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.19□□□□□ -1.42
CCL28-201ENST00000361115 Q8TCH9 128 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 ASCL2Q99929 193 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 ZNF355PQ9NSJ1 428 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 IGHV1-24A0A0C4DH33 117 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 TSPAN13O95857 204 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 TFF1P04155 84 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 MSMBP08118 114 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 TCF24Q7RTU0 167 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 PMCHL2Q9BQD1 86 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 NPVFQ9HCQ7 196 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 KCNIP1Q9NZI2 227 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 ANKRD30BLA7E2S9 258 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 HBZP02008 142 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
CCL28-201ENST00000361115 GPR183P32249 361 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 Q6ZR03 302 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 C2orf91Q6ZV80 131 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 GALMQ96C23 342 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 CENPEQ02224 2701 aa6.19□□□□□ -1.42
CCL28-201ENST00000361115 J3QT63 122 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PSPNO60542 156 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 MRPL33O75394 65 aaKnown RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 OR2J3O76001 311 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 FOXA3P55318 350 aaPredicted RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 WDR31Q8NA23 367 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 HSD17B10Q99714 261 aaKnown RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 C1RLQ9NZP8 487 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 MFAP4P55083 255 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PRR20EP86478 221 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PRR20CP86479 221 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PRR20DP86480 221 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PRR20BP86481 221 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 PRR20AP86496 221 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 TEPPQ6URK8 271 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 FAM234AQ9H0X4 552 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 DNAJC13O75165 2243 aa6.18□□□□□ -1.42
CCL28-201ENST00000361115 HEATR1Q9H583 2144 aaKnown RBP6.18□□□□□ -1.42
CCL28-201ENST00000361115 FN1P02751 2386 aaKnown RBP6.17□□□□□ -1.42
CCL28-201ENST00000361115 OR11H12B2RN74 326 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 FCGR3BO75015 233 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 PROP1O75360 226 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 IGKV3-15P01624 115 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 HLA-DRB1P01911 266 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 OR11H1Q8NG94 326 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 OR10X1Q8NGY0 326 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 OR11H2Q8NH07 326 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 OR4A16Q8NH70 328 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 UFC1Q9Y3C8 167 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 LEPROTL1O95214 131 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 REG1BP48304 166 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 ERVK11-1P61568 191 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 NEGR1Q7Z3B1 354 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 MOB3BQ86TA1 216 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 MTURNQ8N3F0 131 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 TPRX1Q8N7U7 411 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 RFESDQ8TAC1 157 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 CFHR4Q92496 578 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 TIMD4Q96H15 378 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 SLC25A10Q9UBX3 287 aaPredicted RBP6.17□□□□□ -1.42
CCL28-201ENST00000361115 MPC1Q9Y5U8 109 aa6.17□□□□□ -1.42
CCL28-201ENST00000361115 H3BUT2 72 aa6.16□□□□□ -1.42
CCL28-201ENST00000361115 HTR1DP28221 377 aa6.16□□□□□ -1.42
CCL28-201ENST00000361115 ZNF138P52744 262 aa6.16□□□□□ -1.42
CCL28-201ENST00000361115 SMAGPQ0VAQ4 97 aa6.16□□□□□ -1.42
CCL28-201ENST00000361115 NABP2Q9BQ15 211 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms