RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RAMP3O60896 148 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 NABP1Q96AH0 204 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 H0YIZ8 118 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 RPP25Q9BUL9 199 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 PSG8Q9UQ74 426 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 LINC00477Q96M19 166 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 TMEM126AQ9H061 195 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 C19orf48Q6RUI8 117 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 IGHV2-70P01814 119 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 TMEM133Q9H2Q1 129 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 DSCAMO60469 2012 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 CD160O95971 181 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 IGKV1-8A0A0C4DH67 115 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 FOXL2P58012 376 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 CDKN1AP38936 164 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 AGRNO00468 2067 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 CUL9Q8IWT3 2517 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 TMEM258P61165 79 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 VSIRQ9H7M9 311 aa10.97□□□□□ -0.65
SRGAP3-201ENST00000360413 NUP35Q8NFH5 326 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 COL24A1Q17RW2 1714 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 SAP25Q8TEE9 199 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 IL17RELQ6ZVW7 336 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 NKAPP1Q8N9T2 125 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 RCHY1Q96PM5 261 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 C2orf16Q68DN1 1984 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 A0A1W2PRX2 142 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 OBSL1O75147 1896 aa10.96□□□□□ -0.65
SRGAP3-201ENST00000360413 PRR31Q5SQ13 230 aa10.96□□□□□ -0.66
SRGAP3-201ENST00000360413 DOPEY1Q5JWR5 2465 aa10.96□□□□□ -0.66
SRGAP3-201ENST00000360413 PLXNA2O75051 1894 aa10.96□□□□□ -0.66
SRGAP3-201ENST00000360413 RNF5Q99942 180 aa10.96□□□□□ -0.66
SRGAP3-201ENST00000360413 COL18A1P39060 1754 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 CSRP2Q16527 193 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 AGMATQ9BSE5 352 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 FNDC1Q4ZHG4 1894 aaPredicted RBP10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 E9PQ18 207 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 ZNF319Q9P2F9 582 aa10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 MCRIP2Q9BUT9 160 aaKnown RBP10.95□□□□□ -0.66
SRGAP3-201ENST00000360413 SAP30O75446 220 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 BMPERQ8N8U9 685 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 C1QTNF5Q9BXJ0 243 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 FAM223BA6NKX1 122 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 UBL5Q9BZL1 73 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 PILRAQ9UKJ1 303 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GATA3P23771 443 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 C20orf144Q9BQM9 153 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 B5MCH6 92 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 SRSF2Q01130 221 aaKnown RBP10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 IGHV2OR16-5A0A0B4J2B6 119 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE12JA6NER3 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE7O76087 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE12FP0CL80 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE12GP0CL81 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE12IP0CL82 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE4Q13068 117 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 SOCS3O14543 225 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 SRXN1Q9BYN0 137 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 RBM3P98179 157 aaKnown RBP10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 TCF15Q12870 199 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 LYPD1Q8N2G4 141 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 DSCR8Q96T75 97 aa10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 SRSF8Q9BRL6 282 aaKnown RBP10.94□□□□□ -0.66
SRGAP3-201ENST00000360413 H3BQ85 93 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 FCN3O75636 299 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 ZC2HC1BQ5TFG8 222 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 K7EP34 96 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 CELA2AP08217 269 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 SRD5A1P18405 259 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE5Q13069 117 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 GAGE6Q13070 117 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 STPG4Q8N801 248 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 RHODO00212 210 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 CECR9P0C854 216 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 WFDC12Q8WWY7 111 aa10.93□□□□□ -0.66
SRGAP3-201ENST00000360413 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 RSPO4Q2I0M5 234 aaPredicted RBP10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 C9orf139Q6ZV77 190 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 TMEM158Q8WZ71 300 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 LINC00271P0C7V0 271 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 SLAQ13239 276 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 NDUFC2O95298 119 aa10.92□□□□□ -0.66
SRGAP3-201ENST00000360413 PMVKQ15126 192 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms