RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PLXNA4Q9HCM2 1894 aa8.01□□□□□ -1.13
CUX1-203ENST00000360264 SS18Q15532 418 aa8□□□□□ -1.13
CUX1-203ENST00000360264 SERF1AO75920 110 aa8□□□□□ -1.13
CUX1-203ENST00000360264 SPRR3Q9UBC9 169 aa8□□□□□ -1.13
CUX1-203ENST00000360264 SRRM4A7MD48 611 aaKnown RBP8□□□□□ -1.13
CUX1-203ENST00000360264 INS-IGF2F8WCM5 200 aa8□□□□□ -1.13
CUX1-203ENST00000360264 RASL10AQ92737 203 aa8□□□□□ -1.13
CUX1-203ENST00000360264 GGTLC1Q9BX51 225 aa8□□□□□ -1.13
CUX1-203ENST00000360264 NHP2Q9NX24 153 aaKnown RBP8□□□□□ -1.13
CUX1-203ENST00000360264 RCHY1Q96PM5 261 aa8□□□□□ -1.13
CUX1-203ENST00000360264 WFDC6Q9BQY6 131 aa8□□□□□ -1.13
CUX1-203ENST00000360264 GATA2P23769 480 aaPredicted RBP8□□□□□ -1.13
CUX1-203ENST00000360264 DMRTA1Q5VZB9 504 aa8□□□□□ -1.13
CUX1-203ENST00000360264 SUPT4H1P63272 117 aaKnown RBP8□□□□□ -1.13
CUX1-203ENST00000360264 VWC2LB2RUY7 222 aa8□□□□□ -1.13
CUX1-203ENST00000360264 H3BUT2 72 aa8□□□□□ -1.13
CUX1-203ENST00000360264 ACTL10Q5JWF8 245 aa8□□□□□ -1.13
CUX1-203ENST00000360264 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
CUX1-203ENST00000360264 FAM201AQ5SY85 155 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 RHODO00212 210 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 IGHV1-46P01743 117 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 LY96Q9Y6Y9 160 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 PLPPR1Q8TBJ4 325 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 NUP210Q8TEM1 1887 aaPredicted RBP7.99□□□□□ -1.13
CUX1-203ENST00000360264 RAMP1O60894 148 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 LTBRP36941 435 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 LY6G5BQ8NDX9 201 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 RPUSD1Q9UJJ7 312 aaKnown RBP7.99□□□□□ -1.13
CUX1-203ENST00000360264 PDE6HQ13956 83 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 FAM19A2Q8N3H0 131 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 SRD5A1P18405 259 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 IFI27L1Q96BM0 104 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 ZNF479Q96JC4 524 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 NTN3O00634 580 aaPredicted RBP7.99□□□□□ -1.13
CUX1-203ENST00000360264 FOXL1Q12952 345 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 PIP4P2Q8N4L2 257 aa7.99□□□□□ -1.13
CUX1-203ENST00000360264 IL17RELQ6ZVW7 336 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 PSG1P11464 419 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 RPL23P62829 140 aaKnown RBP7.98□□□□□ -1.13
CUX1-203ENST00000360264 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
CUX1-203ENST00000360264 SPATA31B1PQ5VZV4 182 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 ST6GALNAC6Q969X2 333 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 FBLN7Q53RD9 439 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 GAGE2BQ13066 116 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 GAGE2EQ4V326 116 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 TMEM155Q4W5P6 130 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 GAGE2DQ9UEU5 116 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 IGHV1-3A0A0C4DH29 117 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 RAMP3O60896 148 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 GNG5P63218 68 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 DAZ1Q9NQZ3 744 aaKnown RBP7.98□□□□□ -1.13
CUX1-203ENST00000360264 CTSBP07858 339 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 ZNF138P52744 262 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 C3orf36Q3SXR2 165 aa7.98□□□□□ -1.13
CUX1-203ENST00000360264 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 RBMY1FQ15415 496 aaKnown RBP7.97□□□□□ -1.13
CUX1-203ENST00000360264 DEFB121Q5J5C9 76 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 SAMD5Q5TGI4 173 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 A0A1B0GTI1 187 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 TRGV1A0A0A0MS02 117 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 RPRMLQ8N4K4 120 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 TRBV24-1A0A075B6N3 115 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 ATP5G3P48201 142 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 CITED2Q99967 270 aaPredicted RBP7.97□□□□□ -1.13
CUX1-203ENST00000360264 ADMP35318 185 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 C1orf194Q5T5A4 169 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 A0A0G2JMZ2 1700 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 LRRC37A2A6NM11 1700 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 SNAI2O43623 268 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 SPRED2Q7Z698 418 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 NDUFAF3Q9BU61 184 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 SIGMAR1Q99720 223 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 LCNL1Q6ZST4 164 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 KLHL30-AS1Q8NEE0 82 aa7.97□□□□□ -1.13
CUX1-203ENST00000360264 PMS2P5A8MQ11 134 aa7.96□□□□□ -1.13
CUX1-203ENST00000360264 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.13
CUX1-203ENST00000360264 GFRA4Q9GZZ7 299 aa7.96□□□□□ -1.13
CUX1-203ENST00000360264 RPL35AP18077 110 aaKnown RBP7.96□□□□□ -1.14
CUX1-203ENST00000360264 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 TMEM249Q2WGJ8 235 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 TMEM105Q8N8V8 129 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 LYZL4Q96KX0 146 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 PRDM6Q9NQX0 595 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 OCC1Q8TAD7 63 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 TIMM21Q9BVV7 248 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 GSN-AS1Q9NRJ2 163 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 FNDC10F2Z333 226 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 TNFRSF6BO95407 300 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 DEPPQ9NTK1 212 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 D6R8Y8 96 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 APOC4P55056 127 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 AGMATQ9BSE5 352 aa7.96□□□□□ -1.14
CUX1-203ENST00000360264 C1QTNF9P0C862 333 aa7.95□□□□□ -1.14
CUX1-203ENST00000360264 KLF17Q5JT82 389 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms