RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 TECRQ9NZ01 308 aaKnown RBP11.21□□□□□ -0.61
CCNE1-202ENST00000357943 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
CCNE1-202ENST00000357943 BMI1P35226 326 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 TMEM61Q8N0U2 210 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 GATAD1Q8WUU5 269 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 SEPSECSQ9HD40 501 aaKnown RBP11.2□□□□□ -0.62
CCNE1-202ENST00000357943 PFDN2Q9UHV9 154 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 IGKV3-7A0A075B6H7 116 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 SERF2P84101 59 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 FAM90A2PQ658T7 463 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 TCF24Q7RTU0 167 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 GRAMD2BQ96HH9 432 aa11.2□□□□□ -0.62
CCNE1-202ENST00000357943 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 SULT1A2P50226 295 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 RAB2AP61019 212 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 OR8I2Q8N0Y5 310 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 LRRC20Q8TCA0 184 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 MED9Q9NWA0 146 aa11.19□□□□□ -0.62
CCNE1-202ENST00000357943 EIF3GO75821 320 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCNE1-202ENST00000357943 RPL11P62913 178 aaKnown RBP11.18□□□□□ -0.62
CCNE1-202ENST00000357943 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
CCNE1-202ENST00000357943 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
CCNE1-202ENST00000357943 SIGLEC15Q6ZMC9 328 aa11.18□□□□□ -0.62
CCNE1-202ENST00000357943 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
CCNE1-202ENST00000357943 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
CCNE1-202ENST00000357943 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
CCNE1-202ENST00000357943 TSPAN4O14817 238 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 S100A7P31151 101 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 GBGT1Q8N5D6 347 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
CCNE1-202ENST00000357943 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 OR10G9Q8NGN4 311 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 OR10G7Q8NGN6 311 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 OR2K2Q8NGT1 345 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 RPRMQ9NS64 109 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 KRTAP10-11P60412 298 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 LCN12Q6JVE5 192 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 FUT9Q9Y231 359 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 SMAD5-AS1Q9Y6J3 95 aa11.17□□□□□ -0.62
CCNE1-202ENST00000357943 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 TRAV25A0A0B4J276 109 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 HELTA6NFD8 242 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
CCNE1-202ENST00000357943 MBP02144 154 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 CD5P06127 495 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 TFPI2P48307 235 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 EGFEM1PQ0D2K5 195 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 GUCA2BQ16661 112 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 FAM122CQ6P4D5 195 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
CCNE1-202ENST00000357943 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
CCNE1-202ENST00000357943 ZNF705EA8MWA4 302 aaPredicted RBP11.15□□□□□ -0.62
CCNE1-202ENST00000357943 SNRPCP09234 159 aaKnown RBP11.15□□□□□ -0.62
CCNE1-202ENST00000357943 RPL7P18124 248 aaKnown RBP11.15□□□□□ -0.62
CCNE1-202ENST00000357943 RAB5CP51148 216 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 RHOBP62745 196 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 AKR1C8PQ5T2L2 129 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 WFDC3Q8IUB2 231 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 SAT2Q96F10 170 aaPredicted RBP11.15□□□□□ -0.62
CCNE1-202ENST00000357943 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
CCNE1-202ENST00000357943 NOTCH1P46531 2555 aa11.15□□□□□ -0.63
CCNE1-202ENST00000357943 A0A1W2PPV4 95 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 HMGB3O15347 200 aaKnown RBP11.14□□□□□ -0.63
CCNE1-202ENST00000357943 GALR1P47211 349 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 GPR82Q96P67 336 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
CCNE1-202ENST00000357943 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
CCNE1-202ENST00000357943 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
CCNE1-202ENST00000357943 UMAD1C9J7I0 102 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 PYYP10082 97 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 GP9P14770 177 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 CDC34P49427 236 aaPredicted RBP11.13□□□□□ -0.63
CCNE1-202ENST00000357943 FHITP49789 147 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 DNASE2O00115 360 aaPredicted RBP11.13□□□□□ -0.63
CCNE1-202ENST00000357943 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 RAB24Q969Q5 203 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 ZNF503Q96F45 646 aa11.13□□□□□ -0.63
CCNE1-202ENST00000357943 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms