RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 CCDC88CQ9P219 2028 aa10.52□□□□□ -0.72
SMC4-202ENST00000357388 TCTEX1D4Q5JR98 221 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 C18orf32Q8TCD1 76 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 TRBV7-1A0A0A6YYK4 115 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 ANKRD29Q8N6D5 301 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 ACYP1P07311 99 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 C3orf56Q8N813 242 aa10.52□□□□□ -0.73
SMC4-202ENST00000357388 TIMM23O14925 209 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 PFN1P07737 140 aaKnown RBP10.51□□□□□ -0.73
SMC4-202ENST00000357388 AZU1P20160 251 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 LTBRP36941 435 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 ETDBQ3ZM63 59 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 CRYGSP22914 178 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 GAS1P54826 345 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 ZNF474Q6S9Z5 364 aaPredicted RBP10.51□□□□□ -0.73
SMC4-202ENST00000357388 LIME1Q9H400 295 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 SLC25A16P16260 332 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 AMN1Q8IY45 258 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 LAMB2P55268 1798 aa10.51□□□□□ -0.73
SMC4-202ENST00000357388 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 EP300Q09472 2414 aaPredicted RBP10.5□□□□□ -0.73
SMC4-202ENST00000357388 CELA3BP08861 270 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 YPEL3P61236 119 aaPredicted RBP10.5□□□□□ -0.73
SMC4-202ENST00000357388 STPG4Q8N801 248 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 CEND1Q8N111 149 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 SPXQ9BT56 116 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 AHCTF1Q8WYP5 2266 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 MST1P26927 711 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
SMC4-202ENST00000357388 BVES-AS1Q5T3Y7 98 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 HAPLN4Q86UW8 402 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
SMC4-202ENST00000357388 HGFACQ04756 655 aa10.49□□□□□ -0.73
SMC4-202ENST00000357388 FOXF2Q12947 444 aa10.49□□□□□ -0.73
SMC4-202ENST00000357388 SRRM4A7MD48 611 aaKnown RBP10.49□□□□□ -0.73
SMC4-202ENST00000357388 RHODO00212 210 aa10.49□□□□□ -0.73
SMC4-202ENST00000357388 IGHV2-5P01817 119 aa10.49□□□□□ -0.73
SMC4-202ENST00000357388 IL17RELQ6ZVW7 336 aa10.49□□□□□ -0.73
SMC4-202ENST00000357388 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
SMC4-202ENST00000357388 IGHV1-18A0A0C4DH31 117 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 FGF6P10767 208 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 RBM3P98179 157 aaKnown RBP10.48□□□□□ -0.73
SMC4-202ENST00000357388 C1orf159Q96HA4 380 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 FXYD7P58549 80 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 FAM104BQ5XKR9 115 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
SMC4-202ENST00000357388 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 FAM231DQ6ZW35 169 aa10.48□□□□□ -0.73
SMC4-202ENST00000357388 IGHV1-46P01743 117 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 CEACAM8P31997 349 aaPredicted RBP10.47□□□□□ -0.73
SMC4-202ENST00000357388 NTF4P34130 210 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 SUMO4Q6EEV6 95 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 CFPP27918 469 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 MST1LQ2TV78 715 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 IGKV1-12A0A0C4DH73 117 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 FAM223BA6NKX1 122 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 IGKV1D-12P01611 117 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 FAM223AQ8IWN6 122 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 DSCR8Q96T75 97 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 FAM186AA6NE01 2351 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 SYNJ2BPP57105 145 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 MESP1Q9BRJ9 268 aa10.47□□□□□ -0.73
SMC4-202ENST00000357388 IGHG3P01860 377 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 RPL15P61313 204 aaKnown RBP10.46□□□□□ -0.73
SMC4-202ENST00000357388 HAMPP81172 84 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.73
SMC4-202ENST00000357388 CARD19Q96LW7 228 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 LYNX1G3V0Z9 82 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 LYNX1P0DP58 116 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 C2orf66Q6UXQ4 117 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 SHANK2-AS3Q9BTD1 123 aa10.46□□□□□ -0.73
SMC4-202ENST00000357388 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.74
SMC4-202ENST00000357388 M0R1W7 72 aa10.46□□□□□ -0.74
SMC4-202ENST00000357388 VMO1Q7Z5L0 202 aa10.46□□□□□ -0.74
SMC4-202ENST00000357388 C15orf53Q8NAA6 179 aa10.46□□□□□ -0.74
SMC4-202ENST00000357388 TP53TG1Q9Y2A0 90 aa10.46□□□□□ -0.74
SMC4-202ENST00000357388 CD24P25063 80 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 Q6ZWC4 215 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 ZNF114Q8NC26 417 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 SMKR1H3BMG3 65 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 HLA-DRB4P13762 266 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 HLA-DRB4X5D2U9 266 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 TRAV13-1A0A0B4J241 112 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 TGFBR3LH3BV60 316 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 LINC01545Q5VT33 79 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 MCM3APO60318 1980 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 ARMS2P0C7Q2 107 aa10.45□□□□□ -0.74
SMC4-202ENST00000357388 GNLYP22749 145 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms