RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 LAGE3Q14657 143 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 C10orf126Q8N4M7 172 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 SIGLEC9Q9Y336 463 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 RFNGQ9Y644 331 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 RPRMLQ8N4K4 120 aa9.61□□□□□ -0.87
COL9A1-202ENST00000357250 IGKV1D-17A0A075B6S4 117 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 C10orf55Q5SWW7 151 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 TRBV7-9A0A0J9YWB2 115 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 LINC00473A8K010 186 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 B4DSR2 109 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 BUB1B-PAK6H3BSN5 160 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 TSPAN13O95857 204 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 KIF26AQ9ULI4 1882 aaPredicted RBP9.6□□□□□ -0.87
COL9A1-202ENST00000357250 FAM231BA6NCW3 169 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 LYNX1G3V0Z9 82 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 H3BUT2 72 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 TOMM40O96008 361 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 LYNX1P0DP58 116 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 NTF4P34130 210 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 DTX1Q86Y01 620 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 FAM223BA6NKX1 122 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 SNAI2O43623 268 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 RNASE2P10153 161 aaKnown RBP9.6□□□□□ -0.87
COL9A1-202ENST00000357250 SELLP14151 372 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 FBLN7Q53RD9 439 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 FAM223AQ8IWN6 122 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
COL9A1-202ENST00000357250 TRAV40A0A0B4J280 105 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 DTX2Q86UW9 622 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 SMAD7O15105 426 aaKnown RBP9.59□□□□□ -0.87
COL9A1-202ENST00000357250 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
COL9A1-202ENST00000357250 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 MORN3Q6PF18 240 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-202ENST00000357250 ST6GALNAC3Q8NDV1 305 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 NHP2Q9NX24 153 aaKnown RBP9.59□□□□□ -0.87
COL9A1-202ENST00000357250 MED13Q9UHV7 2174 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 NPIPB5A8MRT5 1133 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-202ENST00000357250 TDGF1P13385 188 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 GATA4P43694 442 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 GLRX5Q86SX6 157 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 KIR3DL3Q8N743 410 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 PSG3Q16557 428 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 SCRT1Q9BWW7 348 aa9.59□□□□□ -0.87
COL9A1-202ENST00000357250 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 PLXNA2O75051 1894 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 PRTN3P24158 256 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 OR2K2Q8NGT1 345 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF581Q9P0T4 197 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 CD24P25063 80 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 Q8TCH9 128 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.58□□□□□ -0.88
COL9A1-202ENST00000357250 A0A0G2JNJ9 132 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 CD28P10747 220 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 Q9UFV3 132 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 TRAV3A0A0B4J244 114 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
COL9A1-202ENST00000357250 GZMBP10144 247 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 HGFACQ04756 655 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 CT83Q5H943 113 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 SLC25A20O43772 301 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 CA1P00915 261 aaPredicted RBP9.57□□□□□ -0.88
COL9A1-202ENST00000357250 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 VCYO14598 125 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF492Q9P255 531 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 FREM1Q5H8C1 2179 aa9.57□□□□□ -0.88
COL9A1-202ENST00000357250 NDUFB8O95169 186 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 NDUFS8O00217 210 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 SLC25A16P16260 332 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 LYZL1Q6UWQ5 148 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 PCDH15Q96QU1 1955 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 EXOC3-AS1Q8N2X6 119 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 TMEM86BQ8N661 226 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 TRGV4A0A0C4DH28 118 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 D6R8Y8 96 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 LILRA1O75019 489 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 NDUFS6O75380 124 aaKnown RBP9.56□□□□□ -0.88
COL9A1-202ENST00000357250 LY6DQ14210 128 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
COL9A1-202ENST00000357250 DERL1Q9BUN8 251 aa9.56□□□□□ -0.88
COL9A1-202ENST00000357250 A0A0G2JRQ6 117 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 Q6ZRM9 215 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 LRRK1Q38SD2 2015 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 MKI67P46013 3256 aaKnown RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 GATA3P23771 443 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms