RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 M0R036 132 aa13.89□□□□□ -0.19
CDK11A-202ENST00000356937 OR2C1O95371 312 aa13.89□□□□□ -0.19
CDK11A-202ENST00000356937 GCHFRP30047 84 aa13.89□□□□□ -0.19
CDK11A-202ENST00000356937 FOXE3Q13461 319 aa13.89□□□□□ -0.19
CDK11A-202ENST00000356937 PYY3Q5JQD4 70 aa13.89□□□□□ -0.19
CDK11A-202ENST00000356937 MRPL27Q9P0M9 148 aaKnown RBP13.89□□□□□ -0.19
CDK11A-202ENST00000356937 SETD2Q9BYW2 2564 aaPredicted RBP13.89□□□□□ -0.19
CDK11A-202ENST00000356937 OR10J4P0C629 311 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 KLHDC1Q8N7A1 406 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 FAM167A-AS1Q96KT0 104 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 JMJD8Q96S16 334 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 SLC25A39Q9BZJ4 359 aaPredicted RBP13.88□□□□□ -0.19
CDK11A-202ENST00000356937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.88□□□□□ -0.19
CDK11A-202ENST00000356937 IFNA1P01562 189 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 ELANEP08246 267 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 BCL2P10415 239 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 S100A2P29034 98 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 PSMB3P49720 205 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 CD81P60033 236 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 UBE2G2P60604 165 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF343Q6P1L6 599 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 TOMM20LQ6UXN7 152 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 PQLC2Q6ZP29 291 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF503Q96F45 646 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 YPEL4Q96NS1 127 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 ATP6V0BQ99437 205 aa13.88□□□□□ -0.19
CDK11A-202ENST00000356937 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 KIAA0141Q14154 515 aaPredicted RBP13.87□□□□□ -0.19
CDK11A-202ENST00000356937 ICAM4Q14773 271 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF414Q96IQ9 312 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 PAGE4O60829 102 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 PYYP10082 97 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 RPL15P61313 204 aaKnown RBP13.87□□□□□ -0.19
CDK11A-202ENST00000356937 RELQ04864 619 aaPredicted RBP13.87□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF506Q5JVG8 444 aa13.87□□□□□ -0.19
CDK11A-202ENST00000356937 CRLF1O75462 422 aa13.86□□□□□ -0.19
CDK11A-202ENST00000356937 SNRPCP09234 159 aaKnown RBP13.86□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF124Q15973 351 aa13.86□□□□□ -0.19
CDK11A-202ENST00000356937 C14orf144Q96I85 54 aa13.86□□□□□ -0.19
CDK11A-202ENST00000356937 SRSF2Q01130 221 aaKnown RBP13.85□□□□□ -0.19
CDK11A-202ENST00000356937 PAXXQ9BUH6 204 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 IFITM10A6NMD0 228 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 BMPR1BO00238 502 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 PMS2P11Q13670 270 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 SLC35B3Q9H1N7 401 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 ZFAND3Q9H8U3 227 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 VAX2Q9UIW0 290 aa13.85□□□□□ -0.19
CDK11A-202ENST00000356937 TCF21O43680 179 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 UBE2L3P68036 154 aaKnown RBP13.84□□□□□ -0.19
CDK11A-202ENST00000356937 CST9LP1Q5W188 147 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 SHANK2-AS3Q9BTD1 123 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 C20orf24Q9BUV8 137 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 PEF1Q9UBV8 284 aaKnown RBP13.84□□□□□ -0.19
CDK11A-202ENST00000356937 RABAC1Q9UI14 185 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 H3BRN7 92 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 HSPB1P04792 205 aaKnown RBP13.84□□□□□ -0.19
CDK11A-202ENST00000356937 CEBPGP53567 150 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 REC114Q7Z4M0 266 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 TMEM167BQ9NRX6 74 aa13.84□□□□□ -0.19
CDK11A-202ENST00000356937 ZNF207O43670 478 aaKnown RBP13.83□□□□□ -0.2
CDK11A-202ENST00000356937 LBHQ53QV2 105 aaPredicted RBP13.83□□□□□ -0.2
CDK11A-202ENST00000356937 RNF152Q8N8N0 203 aa13.83□□□□□ -0.2
CDK11A-202ENST00000356937 LINC01006Q8NI28 216 aa13.83□□□□□ -0.2
CDK11A-202ENST00000356937 MEF2BQ02080 365 aaPredicted RBP13.83□□□□□ -0.2
CDK11A-202ENST00000356937 MYOZ3Q8TDC0 251 aa13.83□□□□□ -0.2
CDK11A-202ENST00000356937 TAS2R60P59551 318 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 KHDC1LQ5JSQ8 128 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 HIST2H2BDQ6DRA6 164 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 S100A7AQ86SG5 101 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 STXBP6Q8NFX7 210 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 UBE2E2Q96LR5 201 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 C16orf95Q9H693 158 aa13.82□□□□□ -0.2
CDK11A-202ENST00000356937 YTHDF2Q9Y5A9 579 aaKnown RBP13.82□□□□□ -0.2
CDK11A-202ENST00000356937 C11orf94C9JXX5 98 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 GGCTO75223 188 aaKnown RBP13.81□□□□□ -0.2
CDK11A-202ENST00000356937 SRP19P09132 144 aaKnown RBP13.81□□□□□ -0.2
CDK11A-202ENST00000356937 OR4F5Q8NH21 305 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 OR4F4Q96R69 305 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 A0A1B0GV90 55 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 HAX1O00165 279 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 ATP5G3P48201 142 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 UNQ9165/PRO28630Q6UXU0 137 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 BLNKQ8WV28 456 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 FXYD5Q96DB9 178 aa13.81□□□□□ -0.2
CDK11A-202ENST00000356937 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.25e-6■■■□□ 16
CDK11A-202ENST00000356937 CLPSL1A2RUU4 121 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
CDK11A-202ENST00000356937 GP9P14770 177 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 TAGLN2P37802 199 aaKnown RBP13.8□□□□□ -0.2
CDK11A-202ENST00000356937 RPS10P46783 165 aaKnown RBP13.8□□□□□ -0.2
CDK11A-202ENST00000356937 PKIAP61925 76 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 C18orf65Q6ZTR6 163 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 C11orf44Q8N8P7 122 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 CYB561D1Q8N8Q1 229 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms