RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 CIARTQ8N365 385 aaPredicted RBP10.22□□□□□ -0.77
BDNF-202ENST00000356660 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 PPIAL4CA0A0B4J2A2 164 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 SMIM27A0A1W2PRY6 76 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 PPIAL4GP0DN37 164 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 HIST1H1AQ02539 215 aaPredicted RBP10.22□□□□□ -0.77
BDNF-202ENST00000356660 BSPH1Q075Z2 132 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 MORN5Q5VZ52 161 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 Q8TCH9 128 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 JKAMPQ9P055 326 aa10.22□□□□□ -0.77
BDNF-202ENST00000356660 FOXA2Q9Y261 457 aaPredicted RBP10.22□□□□□ -0.77
BDNF-202ENST00000356660 A1L4Q6 167 aa10.21□□□□□ -0.77
BDNF-202ENST00000356660 B5MCH6 92 aa10.21□□□□□ -0.77
BDNF-202ENST00000356660 F5H697 171 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 IGHV3-49A0A0A0MS15 119 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 A0A1B0GUT8 65 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 FAM90A9PA6NNJ1 464 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 PRR20EP86478 221 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 PRR20CP86479 221 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 PRR20DP86480 221 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 PRR20BP86481 221 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 PRR20AP86496 221 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 TMEM249Q2WGJ8 235 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 SCNM1Q9BWG6 230 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 Q9H3A6 140 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 HIGD1AQ9Y241 93 aa10.21□□□□□ -0.78
BDNF-202ENST00000356660 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 MMP23AO75900 390 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 FCGR2BP31994 310 aaPredicted RBP10.2□□□□□ -0.78
BDNF-202ENST00000356660 HSD52Q0P140 79 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 BVES-AS1Q5T3Y7 98 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 OR4C13Q8NGP0 309 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 CTRLP40313 264 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 FAM71F2Q6NXP2 309 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 FBXL15Q9H469 300 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 SOX21Q9Y651 276 aaPredicted RBP10.2□□□□□ -0.78
BDNF-202ENST00000356660 HIVEP3Q5T1R4 2406 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 IGHV1-24A0A0C4DH33 117 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 FAM231BA6NCW3 169 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 PROP1O75360 226 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 P0C879 139 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 CACNG7P62955 275 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 GUSBP1Q15486 140 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 DUX4L9Q6RFH8 374 aaPredicted RBP10.2□□□□□ -0.78
BDNF-202ENST00000356660 ASCL5Q7RTU5 278 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 LRP4O75096 1905 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 SPTBN4Q9H254 2564 aa10.2□□□□□ -0.78
BDNF-202ENST00000356660 C15orf65H3BRN8 121 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 CKS2P33552 79 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 NEUROG1Q92886 237 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 KIR2DL2P43627 348 aaPredicted RBP10.19□□□□□ -0.78
BDNF-202ENST00000356660 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 TEX45Q8NA69 505 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 C1orf122Q6ZSJ8 110 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 CACNG8Q8WXS5 425 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 TMEM14BQ9NUH8 114 aa10.19□□□□□ -0.78
BDNF-202ENST00000356660 TSSC4Q9Y5U2 329 aaPredicted RBP10.19□□□□□ -0.78
BDNF-202ENST00000356660 SRRM5B3KS81 715 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
BDNF-202ENST00000356660 ZNF329Q86UD4 541 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 YAE1D1Q9NRH1 226 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 C1RLQ9NZP8 487 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 A6NJY4 79 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 IGHV3-23P01764 117 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 ZNF414Q96IQ9 312 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 TCRBV4S1A1TA0A5B7 111 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 CD5LO43866 347 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 HIVEP2P31629 2446 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 SSBP2P81877 361 aaPredicted RBP10.18□□□□□ -0.78
BDNF-202ENST00000356660 CHCHD1Q96BP2 118 aaKnown RBP10.18□□□□□ -0.78
BDNF-202ENST00000356660 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
BDNF-202ENST00000356660 EMP1P54849 157 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 TWIST1Q15672 202 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 C11orf53Q8IXP5 236 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 COL25A1Q9BXS0 654 aaPredicted RBP10.17□□□□□ -0.78
BDNF-202ENST00000356660 VCX2Q9H322 139 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 NBEAQ8NFP9 2946 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 UTF1Q5T230 341 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 RABAC1Q9UI14 185 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 SRRM4A7MD48 611 aaKnown RBP10.17□□□□□ -0.78
BDNF-202ENST00000356660 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 RASL11AQ6T310 242 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 ATP5L2Q7Z4Y8 100 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 Q8N7P7 452 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 ZNF257Q9Y2Q1 563 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 OR4A5Q8NH83 315 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 SLC25A2Q9BXI2 301 aa10.17□□□□□ -0.78
BDNF-202ENST00000356660 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 SMIM17P0DL12 118 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 TMPRSS3P57727 454 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 OSR1Q8TAX0 266 aaPredicted RBP10.16□□□□□ -0.78
BDNF-202ENST00000356660 PRELID3AQ96N28 172 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 SORL1Q92673 2214 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 TMEM189A5PLL7 270 aa10.16□□□□□ -0.78
BDNF-202ENST00000356660 FAM169BQ8N8A8 192 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms