RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 PMCHL1Q16048 86 aa11.29□□□□□ -0.6
ATN1-201ENST00000356654 LHBP01229 141 aa11.29□□□□□ -0.6
ATN1-201ENST00000356654 Q8NA96 180 aa11.29□□□□□ -0.6
ATN1-201ENST00000356654 PARD6GQ9BYG4 376 aaPredicted RBP11.29□□□□□ -0.6
ATN1-201ENST00000356654 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
ATN1-201ENST00000356654 ASIPP42127 132 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 UBE2E1P51965 193 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 OR4C5Q8NGB2 326 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 ZNF25P17030 456 aaPredicted RBP11.28□□□□□ -0.6
ATN1-201ENST00000356654 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 Q8TAT8 98 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 MSMBP08118 114 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
ATN1-201ENST00000356654 HERVK_113P61574 105 aa11.28□□□□□ -0.6
ATN1-201ENST00000356654 NDUFB8O95169 186 aa11.27□□□□□ -0.6
ATN1-201ENST00000356654 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
ATN1-201ENST00000356654 USP9YO00507 2555 aaPredicted RBP11.27□□□□□ -0.61
ATN1-201ENST00000356654 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
ATN1-201ENST00000356654 TSKUQ8WUA8 353 aa11.27□□□□□ -0.61
ATN1-201ENST00000356654 HIVEP2P31629 2446 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 TDGF1P3P51864 188 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 ALPK3Q96L96 1907 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 TMEM8BA6NDV4 472 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
ATN1-201ENST00000356654 IGHV2-70DA0A0C4DH43 119 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 C7orf71A4D174 169 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 Q6AWC8 147 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 C22orf34Q6ZV56 151 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 SOX21Q9Y651 276 aaPredicted RBP11.25□□□□□ -0.61
ATN1-201ENST00000356654 PRB1P04280 392 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 FOXL1Q12952 345 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 USP9XQ93008 2570 aaPredicted RBP11.25□□□□□ -0.61
ATN1-201ENST00000356654 PSMB11A5LHX3 300 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 C14orf144Q96I85 54 aa11.25□□□□□ -0.61
ATN1-201ENST00000356654 CD7P09564 240 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 KIR2DL4Q99706 377 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 DMRT1Q9Y5R6 373 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 SLC25A16P16260 332 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 CEP192Q8TEP8 1941 aa11.24□□□□□ -0.61
ATN1-201ENST00000356654 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 PLXNB1O43157 2135 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 IGHV2-70P01814 119 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 VPS25Q9BRG1 176 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 SNAI2O43623 268 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 LINC01356Q8N9X3 169 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 FNDC4Q9H6D8 234 aaPredicted RBP11.23□□□□□ -0.61
ATN1-201ENST00000356654 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
ATN1-201ENST00000356654 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
ATN1-201ENST00000356654 NDUFS8O00217 210 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 TOMM40O96008 361 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 SLC25A34Q6PIV7 304 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 CRIP3Q6Q6R5 217 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 ST6GALNAC6Q969X2 333 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 GNB1LQ9BYB4 327 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
ATN1-201ENST00000356654 NAV3Q8IVL0 2385 aa11.23□□□□□ -0.61
ATN1-201ENST00000356654 HTTP42858 3142 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 OVOL3O00110 214 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 LCN12Q6JVE5 192 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
ATN1-201ENST00000356654 ZNF414Q96IQ9 312 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 LINC01587Q99440 93 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 FAM209BQ5JX69 171 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 TMEM160Q9NX00 188 aa11.22□□□□□ -0.61
ATN1-201ENST00000356654 ZFYVE26Q68DK2 2539 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 TRBV7-1A0A0A6YYK4 115 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 ARHGAP21Q5T5U3 1957 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 AMMECR1LQ6DCA0 310 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 PEMTQ9UBM1 199 aa11.21□□□□□ -0.61
ATN1-201ENST00000356654 UBE2CO00762 179 aa11.21□□□□□ -0.62
ATN1-201ENST00000356654 Q6ZPA2 131 aa11.21□□□□□ -0.62
ATN1-201ENST00000356654 H3BVH4 76 aa11.21□□□□□ -0.62
ATN1-201ENST00000356654 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms