RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CDSNQ15517 529 aa15.51■□□□□ 0.07
COL13A1-201ENST00000354547 FBLN7Q53RD9 439 aa15.51■□□□□ 0.07
COL13A1-201ENST00000354547 OR8B3Q8NGG8 313 aa15.51■□□□□ 0.07
COL13A1-201ENST00000354547 OR8B2Q96RD0 313 aa15.51■□□□□ 0.07
COL13A1-201ENST00000354547 TPPP3Q9BW30 176 aa15.51■□□□□ 0.07
COL13A1-201ENST00000354547 FAM181BA6NEQ2 426 aa15.5■□□□□ 0.07
COL13A1-201ENST00000354547 ZNF138P52744 262 aa15.5■□□□□ 0.07
COL13A1-201ENST00000354547 RASL11AQ6T310 242 aa15.5■□□□□ 0.07
COL13A1-201ENST00000354547 BCL6BQ8N143 479 aaPredicted RBP15.5■□□□□ 0.07
COL13A1-201ENST00000354547 MRPL27Q9P0M9 148 aaKnown RBP15.5■□□□□ 0.07
COL13A1-201ENST00000354547 CCL21O00585 134 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 A0A1B0GXF2 115 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 IGHV3-23P01764 117 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 IL4P05112 153 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 CTRLP40313 264 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 PVRIGQ6DKI7 326 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 RBM14Q96PK6 669 aaKnown RBP15.49■□□□□ 0.07
COL13A1-201ENST00000354547 SPTAN1Q13813 2472 aaKnown RBP15.49■□□□□ 0.07
COL13A1-201ENST00000354547 CSN3P07498 182 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 FCGR2BP31994 310 aaPredicted RBP15.49■□□□□ 0.07
COL13A1-201ENST00000354547 Q86TA4 180 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 SPOCK3Q9BQ16 436 aa15.49■□□□□ 0.07
COL13A1-201ENST00000354547 M0QZK8 103 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 CHEK1O14757 476 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 HTR1DP28221 377 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 PRSS22Q9GZN4 317 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 H0Y8G0 127 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 K7EIM0 57 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 K7ENP7 123 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 M0R3E3 92 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 LIPFP07098 398 aa15.48■□□□□ 0.07
COL13A1-201ENST00000354547 C19orf71A6NCJ1 209 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 ZNF124Q15973 351 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 URB1-AS1Q96HZ7 61 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 OTORQ9NRC9 128 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 SPTBN4Q9H254 2564 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 IGLC2P0DOY2 106 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 IGLC3P0DOY3 106 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 NBL1P41271 181 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 PLP1P60201 277 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 LINC00173Q6ZV60 143 aa15.47■□□□□ 0.07
COL13A1-201ENST00000354547 HNRNPA3P51991 378 aaKnown RBP15.46■□□□□ 0.07
COL13A1-201ENST00000354547 RBPMS2Q6ZRY4 209 aaKnown RBP15.46■□□□□ 0.07
COL13A1-201ENST00000354547 ATP5L2Q7Z4Y8 100 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 LPAR2Q9HBW0 351 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 NCBP2LA6PVI3 153 aaKnown RBP15.46■□□□□ 0.07
COL13A1-201ENST00000354547 OR2J3O76001 311 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 SPATA12Q7Z6I5 190 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 TMEM208Q9BTX3 173 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 MCRIP2Q9BUT9 160 aaKnown RBP15.46■□□□□ 0.07
COL13A1-201ENST00000354547 UQCR10Q9UDW1 63 aa15.46■□□□□ 0.07
COL13A1-201ENST00000354547 IGHV3OR16-8A0A075B7F1 116 aa15.46■□□□□ 0.06
COL13A1-201ENST00000354547 KLF5Q13887 457 aaPredicted RBP15.46■□□□□ 0.06
COL13A1-201ENST00000354547 TP73-AS1Q9UF72 201 aa15.46■□□□□ 0.06
COL13A1-201ENST00000354547 LY6LH3BQJ8 138 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 IGLV2-11P01706 119 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 BTF3P20290 206 aaKnown RBP15.45■□□□□ 0.06
COL13A1-201ENST00000354547 BPIFA4PQ86YQ2 179 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 OR4F17Q8NGA8 305 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 DPM3Q9P2X0 92 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 NBR2O15453 112 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 ZC2HC1AQ96GY0 325 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 NCOR2Q9Y618 2525 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 CHD8Q9HCK8 2581 aa15.45■□□□□ 0.06
COL13A1-201ENST00000354547 IGHV3-35A0A0C4DH35 117 aa15.44■□□□□ 0.06
COL13A1-201ENST00000354547 RNF125Q96EQ8 232 aa15.44■□□□□ 0.06
COL13A1-201ENST00000354547 TMSB15BA0A087X1C1 80 aa15.44■□□□□ 0.06
COL13A1-201ENST00000354547 GNG7O60262 68 aa15.44■□□□□ 0.06
COL13A1-201ENST00000354547 NPSP0C0P6 89 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 ZNF491Q8N8L2 437 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 TRBV19A0A075B6N1 114 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 C2orf70A6NJV1 201 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 HLA-DRB1P01911 266 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 HINT1P49773 126 aaPredicted RBP15.43■□□□□ 0.06
COL13A1-201ENST00000354547 MUC21A0A0G2JKD1 596 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 MUC21A0A140T8X8 626 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 MUC21Q5SSG8 566 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 SMIM12Q96EX1 92 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 SHANK2-AS3Q9BTD1 123 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 ZNF492Q9P255 531 aa15.43■□□□□ 0.06
COL13A1-201ENST00000354547 ARMS2P0C7Q2 107 aa15.42■□□□□ 0.06
COL13A1-201ENST00000354547 STPG4Q8N801 248 aa15.42■□□□□ 0.06
COL13A1-201ENST00000354547 TMEM14CQ9P0S9 112 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 IGHV1-24A0A0C4DH33 117 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 ZNF785A8K8V0 405 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 IGLL1P15814 213 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 KLHDC1Q8N7A1 406 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 C8orf49Q96NF6 230 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 RAB1BQ9H0U4 201 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 PSG8Q9UQ74 426 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 MAP1AP78559 2803 aaPredicted RBP15.41■□□□□ 0.06
COL13A1-201ENST00000354547 LOC105371242A0A075B767 164 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 Q6ZVH6 145 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 TIMD4Q96H15 378 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 TMEM70Q9BUB7 260 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 LAMTOR2Q9Y2Q5 125 aa15.41■□□□□ 0.06
COL13A1-201ENST00000354547 LOC102724200A0A096LPH7 203 aaPredicted RBP15.4■□□□□ 0.06
COL13A1-201ENST00000354547 COL5A1-AS1Q5SY13 56 aa15.4■□□□□ 0.06
COL13A1-201ENST00000354547 IGFL4Q6B9Z1 124 aa15.4■□□□□ 0.06
COL13A1-201ENST00000354547 SIGLEC15Q6ZMC9 328 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms