RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ZNF664Q8N3J9 261 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TANC2Q9HCD6 1990 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 PRR33A8MZF0 331 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TIMP3P35625 211 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 LY6G5BQ8NDX9 201 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 LRP5O75197 1615 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TM4SF5O14894 197 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 CTSBP07858 339 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TMEM92Q6UXU6 159 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 PATE3B3GLJ2 98 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 OVOL1O14753 267 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 CELA2AP08217 269 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 C9orf40Q8IXQ3 194 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 LINC01560Q8TB33 94 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TRPM3Q9HCF6 1732 aaPredicted RBP6.67□□□□□ -1.34
SCN8A-201ENST00000354534 MED13LQ71F56 2210 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 PLXNB1O43157 2135 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 EFNB3Q15768 340 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 LIMS2Q7Z4I7 341 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 C8orf46Q8TAG6 207 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 FOXD3Q9UJU5 478 aaPredicted RBP6.67□□□□□ -1.34
SCN8A-201ENST00000354534 SRRM4A7MD48 611 aaKnown RBP6.67□□□□□ -1.34
SCN8A-201ENST00000354534 CD24P25063 80 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 PAX8Q06710 450 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 KLHDC3Q9BQ90 382 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 RSPO4Q2I0M5 234 aaPredicted RBP6.67□□□□□ -1.34
SCN8A-201ENST00000354534 A0A087WWL8 130 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 NXPH4O95158 308 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 TEX38Q6PEX7 206 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 YBX2Q9Y2T7 364 aaKnown RBP6.67□□□□□ -1.34
SCN8A-201ENST00000354534 PVRIGQ6DKI7 326 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 DSCAML1Q8TD84 2053 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 IGHV1OR15-9A0A0B4J2B8 117 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 PSMB8P28062 276 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
SCN8A-201ENST00000354534 C1orf53Q5VUE5 145 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 C14orf178Q8N769 122 aaPredicted RBP6.66□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF525Q8N782 197 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 CRYGCP07315 174 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 CELA3AP09093 270 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 RNASE2P10153 161 aaKnown RBP6.66□□□□□ -1.34
SCN8A-201ENST00000354534 NAV3Q8IVL0 2385 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 SAP30O75446 220 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 CEND1Q8N111 149 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 USF3Q68DE3 2245 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 IFI6P09912 130 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 FBLIM1Q8WUP2 373 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 FAM168AQ92567 244 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 C7orf69Q9H7B7 122 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 IGHV4-4A0A075B6R2 117 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 RAMP3O60896 148 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 ZIC4Q8N9L1 334 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 IGFBPL1Q8WX77 278 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 PLAC1Q9HBJ0 212 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
SCN8A-201ENST00000354534 TNRC6BQ9UPQ9 1833 aaKnown RBP6.66□□□□□ -1.34
SCN8A-201ENST00000354534 SLC25A48Q6ZT89 311 aaKnown RBP6.66□□□□□ -1.34
SCN8A-201ENST00000354534 PAPPAQ13219 1627 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 C15orf61A6NNL5 157 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 GREM1O60565 184 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 ACP7Q6ZNF0 438 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 WFDC11Q8NEX6 87 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 R3HDMLQ9H3Y0 253 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 TRPM7Q96QT4 1865 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 TRAV13-2A0A0B4J235 113 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 FHL5Q5TD97 284 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 TSC2P49815 1807 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 SORL1Q92673 2214 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 SH2D1AO60880 128 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 CDCP2Q5VXM1 449 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 LINC01551Q86U37 167 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 SLC25A28Q96A46 364 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 FAM208BQ5VWN6 2430 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 THBDP07204 575 aa6.65□□□□□ -1.34
SCN8A-201ENST00000354534 EREGO14944 169 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 ZNF721Q8TF20 911 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 LIME1Q9H400 295 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 IGKV3D-7A0A0C4DH55 119 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 AMELYQ99218 206 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 PRO1854Q9UHT4 67 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 PRSS22Q9GZN4 317 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 PILRAQ9UKJ1 303 aa6.65□□□□□ -1.35
SCN8A-201ENST00000354534 NBR2O15453 112 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 CDKN1BP46527 198 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 CFHR3Q02985 330 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 LHFPL6Q9Y693 200 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 SONP18583 2426 aaKnown RBP6.64□□□□□ -1.35
SCN8A-201ENST00000354534 IGHV1OR15-1A0A075B7D0 117 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 B9A039 149 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 CISD3P0C7P0 127 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 RHODO00212 210 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 SLC25A16P16260 332 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 COX5BP10606 129 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
SCN8A-201ENST00000354534 SLC25A47Q6Q0C1 308 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms