RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RELQ04864 619 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 KLRD1Q13241 179 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 KLF5Q13887 457 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM177Q53S58 311 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 Q56UQ5 140 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 HCP5Q6MZN7 132 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 Q6ZVH6 145 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 LINC00305Q7Z4B0 112 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 KIR3DL3Q8N743 410 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 ZNF596Q8TC21 504 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM133Q9H2Q1 129 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 ZNF430Q9H8G1 570 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 PDZD2O15018 2839 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV2-26A0A0B4J1V2 119 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 OR2J3O76001 311 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 IGLV1-47P01700 117 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 HIST1H1EP10412 219 aaKnown RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM30BQ3MIR4 351 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 FBLN7Q53RD9 439 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 RNASEKQ6P5S7 137 aaKnown RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 LINC00322Q6ZN03 302 aaPredicted RBP6.83□□□□□ -1.32
TRIM55-204ENST00000353317 SPATA12Q7Z6I5 190 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 OR1L4Q8NGR5 311 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
TRIM55-204ENST00000353317 A0A1B0GXF2 115 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 IGLL1P15814 213 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 COX7A1P24310 79 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 CD24P25063 80 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 HINT1P49773 126 aaPredicted RBP6.82□□□□□ -1.32
TRIM55-204ENST00000353317 BPIFB3P59826 476 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 OR2D3Q8NGH3 330 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 OR4C13Q8NGP0 309 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM167AQ8TBQ9 72 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 BLNKQ8WV28 456 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 PERPQ96FX8 193 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 ONECUT1Q9UBC0 465 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 CCDC168Q8NDH2 2452 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 PRRC2AP48634 2157 aaKnown RBP6.82□□□□□ -1.32
TRIM55-204ENST00000353317 LOC105371242A0A075B767 164 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV4-61A0A0C4DH41 118 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 MOSP00540 346 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 ORM2P19652 201 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 UBE2G1P62253 170 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 TCF24Q7RTU0 167 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 THAP8Q8NA92 274 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 TNFRSF14Q92956 283 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 EPDR1Q9UM22 224 aa6.82□□□□□ -1.32
TRIM55-204ENST00000353317 MRPS16Q9Y3D3 137 aaKnown RBP6.82□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV3-72A0A0B4J1Y9 119 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 A0A1W2PRD5 423 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 A0A1W2PRF3 423 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 A0A1W2PRM7 423 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 PGPA6NDG6 321 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 SH2D7A6NKC9 451 aaPredicted RBP6.81□□□□□ -1.32
TRIM55-204ENST00000353317 IGLV2-23P01705 113 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 COX6B1P14854 86 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 LINC00311Q8N616 119 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 OR4F17Q8NGA8 305 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 CHRDL1Q9BU40 450 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 CLEC5AQ9NY25 188 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 RPH3ALQ9UNE2 315 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 HECTD1Q9ULT8 2610 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 A0A1W2PPI3 338 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 M0QZ24 198 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 CCL25O15444 150 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 SLC25A5P05141 298 aaKnown RBP6.81□□□□□ -1.32
TRIM55-204ENST00000353317 LIPFP07098 398 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 ATP5J2P56134 94 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 OR1B1Q8NGR6 318 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 OR10X1Q8NGY0 326 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 VSTM2AQ8TAG5 236 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 TP73-AS1Q9UF72 201 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 KLF12Q9Y4X4 402 aa6.81□□□□□ -1.32
TRIM55-204ENST00000353317 C20orf202A1L168 122 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 SUB1P53999 127 aaKnown RBP eCLIP6.8□□□□□ -1.32
TRIM55-204ENST00000353317 FOXA3P55318 350 aaPredicted RBP6.8□□□□□ -1.32
TRIM55-204ENST00000353317 FAM120AOSQ5T036 256 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 C10orf105Q8TEF2 133 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 ORAOV1Q8WV07 137 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 GPR82Q96P67 336 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 CR1P17927 2039 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 TLN2Q9Y4G6 2542 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 LY6LH3BQJ8 138 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 BUB1B-PAK6H3BSN5 160 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 H3BTX0 84 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 SLC25A17O43808 307 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 ZNF137PP52743 207 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 HBBP68871 147 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms