RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CRYGDP07320 174 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 SRIP30626 198 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 FGF12P61328 243 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 TMEM97Q5BJF2 176 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 FAM222AQ5U5X8 452 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 OR5A1Q8NGJ0 315 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 IGKV1D-8A0A087WSZ0 117 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 OCIAD2Q56VL3 154 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 LYPD6Q86Y78 171 aa4.79□□□□□ -1.64
RFC1-201ENST00000349703 SLC25A20O43772 301 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 TSPOP30536 169 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 HERVK_113P63121 156 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 PSG3Q16557 428 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 C10orf128Q5T292 105 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 Q6ZS49 121 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 LINC01551Q86U37 167 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 TMEM254Q8TBM7 123 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 ZNF488Q96MN9 340 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 TMEM38BQ9NVV0 291 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 FOXI3A8MTJ6 420 aaPredicted RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 NTN3O00634 580 aaPredicted RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 ZNF816Q0VGE8 651 aaPredicted RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 FLVCR1-AS1Q8TAF5 88 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 TMEM126AQ9H061 195 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 TMEM30CPA0ZSE6 113 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 GNB2P62879 340 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 WDR82Q6UXN9 313 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 C1orf147Q96MC9 270 aaPredicted RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 CACNA1CQ13936 2221 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 CDX4O14627 284 aaPredicted RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 IGKV3-20P01619 116 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 GPX1P07203 203 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 GZMHP20718 246 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 Q8NBF4 154 aa4.78□□□□□ -1.64
RFC1-201ENST00000349703 MRPL27Q9P0M9 148 aaKnown RBP4.78□□□□□ -1.64
RFC1-201ENST00000349703 FRMPD3Q5JV73 1810 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 PLXND1Q9Y4D7 1925 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 SPINK4O60575 86 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 MRPL33O75394 65 aaKnown RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 DUSP14O95147 198 aaKnown RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 IGKV3-11P04433 115 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 SCTP09683 121 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 NHLRC4P0CG21 123 aaPredicted RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 IGLC2P0DOY2 106 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 SEC11AP67812 179 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 IBA57Q5T440 356 aaKnown RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 SH2D6Q7Z4S9 175 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 ARHGEF17Q96PE2 2063 aaPredicted RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 SCN3AQ9NY46 2000 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 IGKV1D-43A0A0B4J1Z2 117 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 C9JCJ5 164 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 H7C423 109 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 HYPMO75409 117 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 LGALS7P47929 136 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 DSCR4P56555 118 aaPredicted RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 HIST1H1AQ02539 215 aaPredicted RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 SPEM1Q8N4L4 309 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 VSIRQ9H7M9 311 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 MPC1Q9Y5U8 109 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 COL4A3Q01955 1670 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 ZNF32P17041 273 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 OPRK1P41145 380 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 RBX1P62877 108 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 ADORA2A-AS1P86434 159 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 NFE4Q86UQ8 179 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 IGLV5-52A0A0A0MRZ9 124 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 PEX7O00628 323 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 ESDP10768 282 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 RPL27AP46776 148 aaKnown RBP4.77□□□□□ -1.65
RFC1-201ENST00000349703 MORN2Q502X0 79 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 PSMG4Q5JS54 123 aa4.77□□□□□ -1.65
RFC1-201ENST00000349703 TRBV6-6A0A0A6YYG2 114 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 IGHV2OR16-5A0A0B4J2B6 119 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 IZUMO1RA6ND01 250 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 LEPROTL1O95214 131 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 SHISA6Q6ZSJ9 500 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 OR1L1Q8NH94 360 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 IGHV2-26A0A0B4J1V2 119 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 A0A0G2JMM0 328 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 LOC100131303A0A0U1RQF7 123 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 SPTY2D1-AS1A0A0U1RR47 76 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 A0A1W2PPB8 328 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 KIR3DP1A8MWS1 328 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 TOMM40O96008 361 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 CT45A10P0DMU9 189 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 PPP1R27Q86WC6 154 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 OR2M3Q8NG83 312 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 C19orf24Q9BVV8 132 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 NUP210Q8TEM1 1887 aaPredicted RBP4.76□□□□□ -1.65
RFC1-201ENST00000349703 CD5LO43866 347 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 OR2H2O95918 312 aa4.76□□□□□ -1.65
RFC1-201ENST00000349703 GCHFRP30047 84 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms