RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 IGKV1-17P01599 117 aa14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 PLGLAQ15195 96 aa14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 FMC1Q96HJ9 113 aa14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 VSTM5A8MXK1 200 aa14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 FBLN7Q53RD9 439 aa14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 TIMM8BQ9Y5J9 83 aaPredicted RBP14.35□□□□□ -0.11
PTP4A3-202ENST00000349124 ANKHD1Q8IWZ3 2542 aaKnown RBP14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 I3L2K1 104 aa14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 COL8A1P27658 744 aa14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 GRNP28799 593 aaKnown RBP14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 ATP5L2Q7Z4Y8 100 aa14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 RPEQ96AT9 228 aa14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 CACNA1BQ00975 2339 aa14.34□□□□□ -0.11
PTP4A3-202ENST00000349124 TRAV9-2A0A087WT02 112 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 PPIAL4CA0A0B4J2A2 164 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 A0A1W2PRD5 423 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 A0A1W2PRF3 423 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 A0A1W2PRM7 423 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 PPIAL4GP0DN37 164 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 Q86TA4 180 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 WNK2Q9Y3S1 2297 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 CNIH1O95406 144 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 CSN3P07498 182 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 PLP1P60201 277 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 TCF15Q12870 199 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 RBPMS2Q6ZRY4 209 aaKnown RBP14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 HILPDAQ9Y5L2 63 aa14.33□□□□□ -0.12
PTP4A3-202ENST00000349124 IGHV1-24A0A0C4DH33 117 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 SIAH2O43255 324 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 APOBEC3AP31941 199 aaPredicted RBP14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 UNQ5815/PRO19632Q6UWF5 114 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 KLHDC1Q8N7A1 406 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 RASL11BQ9BPW5 248 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 H0Y8G0 127 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 OVOL3O00110 214 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 ZFP30Q9Y2G7 519 aa14.32□□□□□ -0.12
PTP4A3-202ENST00000349124 hDV102S1A0JD36 115 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 TIMM23O14925 209 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 GAGE1Q13065 139 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 RBM14Q96PK6 669 aaKnown RBP14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 M0R3E3 92 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 ZC2HC1AQ96GY0 325 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 PMCHL2Q9BQD1 86 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 TMEM70Q9BUB7 260 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 OTORQ9NRC9 128 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 ONECUT1Q9UBC0 465 aa14.31□□□□□ -0.12
PTP4A3-202ENST00000349124 K7EIM0 57 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 TCF21O43680 179 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 ZNF492Q9P255 531 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 CHEK1O14757 476 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 TPPP3Q9BW30 176 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 ATRXP46100 2492 aa14.3□□□□□ -0.12
PTP4A3-202ENST00000349124 PTPRQQ9UMZ3 2332 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 LOC102724200A0A096LPH7 203 aaPredicted RBP14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 OR4C46A6NHA9 309 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 ARMS2P0C7Q2 107 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 LINC00614P0C842 121 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 ARF6P62330 175 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 OR4F17Q8NGA8 305 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 SMIM12Q96EX1 92 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 CRIP1P50238 77 aa14.29□□□□□ -0.12
PTP4A3-202ENST00000349124 NPIPB6E9PJ23 425 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 CD3EP07766 207 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 NGBQ9NPG2 151 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 LEPROTL1O95214 131 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 KLRD1Q13241 179 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 CT83Q5H943 113 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 ERASQ7Z444 233 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 TMUB1Q9BVT8 246 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 TRBV19A0A075B6N1 114 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 B9A039 149 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 SYS1-DBNDD2H3BUS1 97 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 RBPJQ06330 500 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 MUC15Q8N387 334 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 TNFRSF14Q92956 283 aa14.28□□□□□ -0.12
PTP4A3-202ENST00000349124 LY6LH3BQJ8 138 aa14.27□□□□□ -0.12
PTP4A3-202ENST00000349124 IL4P05112 153 aa14.27□□□□□ -0.12
PTP4A3-202ENST00000349124 MUC21A0A0G2JKD1 596 aa14.27□□□□□ -0.13
PTP4A3-202ENST00000349124 MUC21A0A140T8X8 626 aa14.27□□□□□ -0.13
PTP4A3-202ENST00000349124 FAM90A27PA6NNH2 459 aa14.27□□□□□ -0.13
PTP4A3-202ENST00000349124 MUC21Q5SSG8 566 aa14.27□□□□□ -0.13
PTP4A3-202ENST00000349124 ZNF491Q8N8L2 437 aa14.27□□□□□ -0.13
PTP4A3-202ENST00000349124 TMEM14CQ9P0S9 112 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 MRPS16Q9Y3D3 137 aaKnown RBP14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 IGHV3-23P01764 117 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 ZNF672Q499Z4 452 aaPredicted RBP14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 SIGLEC15Q6ZMC9 328 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 C8orf49Q96NF6 230 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 SHANK2-AS3Q9BTD1 123 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 GFRA4Q9GZZ7 299 aa14.26□□□□□ -0.13
PTP4A3-202ENST00000349124 TMSB15BA0A087X1C1 80 aa14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 HTR1DP28221 377 aa14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 HRNRQ86YZ3 2850 aaPredicted RBP14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 CCL25O15444 150 aa14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 HOXB4P17483 251 aaPredicted RBP14.25□□□□□ -0.13
PTP4A3-202ENST00000349124 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms