RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LYPD2Q6UXB3 125 aa18.81■□□□□ 0.6
NPAS3-201ENST00000346562 FAM90A2PQ658T7 463 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 TMEM14EPQ6UXP3 125 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 TIMM21Q9BVV7 248 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 TRAV13-1A0A0B4J241 112 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 OVOL3O00110 214 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 IGKV1-5P01602 117 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 ZNF562Q6V9R5 426 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 TRPT1Q86TN4 253 aaKnown RBP18.8■□□□□ 0.6
NPAS3-201ENST00000346562 ANAPC10Q9UM13 185 aa18.8■□□□□ 0.6
NPAS3-201ENST00000346562 E9PQ18 207 aa18.79■□□□□ 0.6
NPAS3-201ENST00000346562 GAS1P54826 345 aa18.79■□□□□ 0.6
NPAS3-201ENST00000346562 RPL32P62910 135 aaKnown RBP18.79■□□□□ 0.6
NPAS3-201ENST00000346562 DAD1P61803 113 aa18.79■□□□□ 0.6
NPAS3-201ENST00000346562 ATRAIDQ6UW56 229 aa18.79■□□□□ 0.6
NPAS3-201ENST00000346562 LY6G5BQ8NDX9 201 aa18.79■□□□□ 0.6
NPAS3-201ENST00000346562 DEFB131AP59861 70 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 CRIPAKQ8N1N5 446 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 UBE2E1P51965 193 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 OTOFQ9HC10 1997 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 DEFB104AQ8WTQ1 72 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 ARID1AO14497 2285 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 WNK3Q9BYP7 1800 aa18.78■□□□□ 0.6
NPAS3-201ENST00000346562 FAM110DQ8TAY7 271 aaPredicted RBP18.78■□□□□ 0.6
NPAS3-201ENST00000346562 E7EQL1 145 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 EREGO14944 169 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 RUSC1-AS1Q66K80 236 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 A0A087WWL8 130 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 LINC00473A8K010 186 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 FNDC10F2Z333 226 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 RP1L1Q8IWN7 2480 aaPredicted RBP18.77■□□□□ 0.6
NPAS3-201ENST00000346562 TRBV24-1A0A075B6N3 115 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 ZNF561-AS1K7EIQ3 104 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 IGFL4Q6B9Z1 124 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 NUP35Q8NFH5 326 aa18.77■□□□□ 0.6
NPAS3-201ENST00000346562 B3GALT5-AS1P59052 145 aa18.77■□□□□ 0.59
NPAS3-201ENST00000346562 MCRIP2Q9BUT9 160 aaKnown RBP18.77■□□□□ 0.59
NPAS3-201ENST00000346562 SIGMAR1Q99720 223 aa18.76■□□□□ 0.59
NPAS3-201ENST00000346562 PRIMA1Q86XR5 153 aa18.76■□□□□ 0.59
NPAS3-201ENST00000346562 SHANK2-AS3Q9BTD1 123 aa18.76■□□□□ 0.59
NPAS3-201ENST00000346562 PIKFYVEQ9Y2I7 2098 aa18.76■□□□□ 0.59
NPAS3-201ENST00000346562 Q96MF0 132 aa18.76■□□□□ 0.59
NPAS3-201ENST00000346562 A0A0G2JMZ2 1700 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 LRRC37A2A6NM11 1700 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 LINC01551Q86U37 167 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 TMEM158Q8WZ71 300 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 PDE6HQ13956 83 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 F5H768 121 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 KNTC1P50748 2209 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 RHODO00212 210 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 C2orf82Q6UX34 121 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 GLRX5Q86SX6 157 aa18.75■□□□□ 0.59
NPAS3-201ENST00000346562 A6NNC1 897 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 APOC4P55056 127 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 Q86TA4 180 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 BCL6BQ8N143 479 aaPredicted RBP18.74■□□□□ 0.59
NPAS3-201ENST00000346562 LIME1Q9H400 295 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 K7ENP7 123 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 RNASE2P10153 161 aaKnown RBP18.74■□□□□ 0.59
NPAS3-201ENST00000346562 NTF4P34130 210 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 CKAP5Q14008 2032 aa18.74■□□□□ 0.59
NPAS3-201ENST00000346562 IL17RELQ6ZVW7 336 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 DMRTC2Q8IXT2 367 aaPredicted RBP18.73■□□□□ 0.59
NPAS3-201ENST00000346562 IGHV1-69DA0A0B4J2H0 117 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 IGHV1-69P01742 117 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 GFRA4Q9GZZ7 299 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 GUSBP1Q15486 140 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 UBE2CO00762 179 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 HIST1H2BLQ99880 126 aa18.73■□□□□ 0.59
NPAS3-201ENST00000346562 Q6ZS49 121 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 TRBV25-1A0A075B6N4 114 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 NDUFB8O95169 186 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 HGFACQ04756 655 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 LY6HO94772 140 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 RMI2Q96E14 147 aa18.72■□□□□ 0.59
NPAS3-201ENST00000346562 ATP6V0E1O15342 81 aa18.71■□□□□ 0.59
NPAS3-201ENST00000346562 SPXQ9BT56 116 aa18.71■□□□□ 0.59
NPAS3-201ENST00000346562 J3QLI3 93 aa18.71■□□□□ 0.59
NPAS3-201ENST00000346562 HOXD3P31249 432 aaPredicted RBP18.71■□□□□ 0.59
NPAS3-201ENST00000346562 TMEM75Q8N9X5 138 aa18.71■□□□□ 0.59
NPAS3-201ENST00000346562 NKAPP1Q8N9T2 125 aa18.7■□□□□ 0.58
NPAS3-201ENST00000346562 CYTL1Q9NRR1 136 aa18.7■□□□□ 0.58
NPAS3-201ENST00000346562 GATA4P43694 442 aa18.7■□□□□ 0.58
NPAS3-201ENST00000346562 FOXL2NBQ6ZUU3 175 aa18.7■□□□□ 0.58
NPAS3-201ENST00000346562 RPP25LQ8N5L8 163 aaKnown RBP18.7■□□□□ 0.58
NPAS3-201ENST00000346562 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
NPAS3-201ENST00000346562 CXCL1P09341 107 aa18.7■□□□□ 0.58
NPAS3-201ENST00000346562 SSBP2P81877 361 aaPredicted RBP18.69■□□□□ 0.58
NPAS3-201ENST00000346562 ZNF48Q96MX3 618 aaPredicted RBP18.69■□□□□ 0.58
NPAS3-201ENST00000346562 XCL2Q9UBD3 114 aa18.69■□□□□ 0.58
NPAS3-201ENST00000346562 C15orf62A8K5M9 175 aa18.69■□□□□ 0.58
NPAS3-201ENST00000346562 HIST3H2BBQ8N257 126 aa18.69■□□□□ 0.58
NPAS3-201ENST00000346562 DLX4Q92988 240 aaPredicted RBP18.69■□□□□ 0.58
NPAS3-201ENST00000346562 MRPL27Q9P0M9 148 aaKnown RBP18.69■□□□□ 0.58
NPAS3-201ENST00000346562 DOCK4Q8N1I0 1966 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 GAGE12JA6NER3 117 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 GAGE1Q13065 139 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 GAGE2BQ13066 116 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 GAGE4Q13068 117 aa18.68■□□□□ 0.58
NPAS3-201ENST00000346562 GAGE5Q13069 117 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms