RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PLEKHB2Q96CS7 222 aa9.9□□□□□ -0.82
COL12A1-202ENST00000345356 TRGV9Q99603 122 aa9.9□□□□□ -0.83
COL12A1-202ENST00000345356 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.83
COL12A1-202ENST00000345356 PRB3Q04118 309 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-202ENST00000345356 Q8TAT8 98 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 LCTP09848 1927 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 AHCTF1Q8WYP5 2266 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 CLPSP04118 112 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 Q6P435 159 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 C1orf210Q8IVY1 113 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 WIPF3A6NGB9 483 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 CEND1Q8N111 149 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 ZNF492Q9P255 531 aa9.89□□□□□ -0.83
COL12A1-202ENST00000345356 PLAURQ03405 335 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 GAGE2AQ6NT46 116 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 SMRP1Q8NCR6 262 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 IMMP1LQ96LU5 166 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 SDK2Q58EX2 2172 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 PTPRDP23468 1912 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 ZNF318Q5VUA4 2279 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 CT83Q5H943 113 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 FOXG1P55316 489 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-202ENST00000345356 SAP25Q8TEE9 199 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 RPUSD1Q9UJJ7 312 aaKnown RBP9.88□□□□□ -0.83
COL12A1-202ENST00000345356 FNDC10F2Z333 226 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 NBR2O15453 112 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 PLXNA1Q9UIW2 1896 aa9.88□□□□□ -0.83
COL12A1-202ENST00000345356 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 CASP8AP2Q9UKL3 1982 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 FAM231DQ6ZW35 169 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 IGLV3-12A0A075B6K2 115 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 K7EN84 100 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 TCF15Q12870 199 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 LY6EQ16553 131 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 ANXA2RQ3ZCQ2 193 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-202ENST00000345356 HAX1O00165 279 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 SIVA1O15304 175 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 EFEMP2O95967 443 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 IGKV1-39P01597 117 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 IGKV1D-39P04432 117 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 MED12Q93074 2177 aa9.87□□□□□ -0.83
COL12A1-202ENST00000345356 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-202ENST00000345356 RNASE2P10153 161 aaKnown RBP9.86□□□□□ -0.83
COL12A1-202ENST00000345356 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 MYMXA0A1B0GTQ4 84 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 SH2D6Q7Z4S9 175 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 PRR7Q8TB68 274 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 ATP1A1-AS1Q5TC04 95 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 DUX3Q96PT4 197 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 LTBP4Q8N2S1 1624 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 SLC25A16P16260 332 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 TMEM133Q9H2Q1 129 aa9.86□□□□□ -0.83
COL12A1-202ENST00000345356 MORN3Q6PF18 240 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-202ENST00000345356 SHANK3Q9BYB0 1731 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 C11orf52Q96A22 123 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 CD177Q8N6Q3 437 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 ZNF474Q6S9Z5 364 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-202ENST00000345356 GATD1Q8NB37 220 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 POLR2AP24928 1970 aaKnown RBP9.85□□□□□ -0.83
COL12A1-202ENST00000345356 MRPL14Q6P1L8 145 aaKnown RBP9.85□□□□□ -0.83
COL12A1-202ENST00000345356 DPH3P1Q9H4G8 78 aa9.85□□□□□ -0.83
COL12A1-202ENST00000345356 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 TMEM167AQ8TBQ9 72 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 SIGLEC8Q9NYZ4 499 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 FANCMQ8IYD8 2048 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 FCN3O75636 299 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 TAX1BP3O14907 124 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 LYPD1Q8N2G4 141 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 NRXN2Q9P2S2 1712 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-202ENST00000345356 OR11H6Q8NGC7 330 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 SRRM5B3KS81 715 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 CSRP1P21291 193 aaKnown RBP9.84□□□□□ -0.83
COL12A1-202ENST00000345356 PMVKQ15126 192 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 TAL2Q16559 108 aa9.84□□□□□ -0.83
COL12A1-202ENST00000345356 SLC25A20O43772 301 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 FAM27E3Q08E93 113 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 DOCK6Q96HP0 2047 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 ANK1P16157 1881 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 KIAA2026Q5HYC2 2103 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 GGNQ86UU5 652 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 KLF5Q13887 457 aaPredicted RBP9.83□□□□□ -0.84
COL12A1-202ENST00000345356 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
COL12A1-202ENST00000345356 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 VCYO14598 125 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 FGF6P10767 208 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 VWCEQ96DN2 955 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
COL12A1-202ENST00000345356 PRSS46E5RG02 174 aa9.82□□□□□ -0.84
COL12A1-202ENST00000345356 FOXC1Q12948 553 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms