RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 IGLV2-11P01706 119 aa16.89■□□□□ 0.29
CCDC38-201ENST00000344280 CIARTQ8N365 385 aaPredicted RBP16.89■□□□□ 0.29
CCDC38-201ENST00000344280 SMIM12Q96EX1 92 aa16.89■□□□□ 0.29
CCDC38-201ENST00000344280 M0R1W7 72 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 ZNF324O75467 553 aaPredicted RBP16.88■□□□□ 0.29
CCDC38-201ENST00000344280 NDPQ00604 133 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 GOLT1AQ6ZVE7 132 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 C2orf88Q9BSF0 95 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 OTORQ9NRC9 128 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 PAM16Q9Y3D7 125 aa16.88■□□□□ 0.29
CCDC38-201ENST00000344280 A0A1B0GXF2 115 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 ZFP36P26651 326 aaKnown RBP16.87■□□□□ 0.29
CCDC38-201ENST00000344280 C5orf64Q2M2E5 130 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 ZNF491Q8N8L2 437 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 CHRDL1Q9BU40 450 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 CEACAM3P40198 252 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 Q86TA4 180 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 NIT1Q86X76 327 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 SHANK2-AS3Q9BTD1 123 aa16.87■□□□□ 0.29
CCDC38-201ENST00000344280 P01737 135 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 IL4P05112 153 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 VMO1Q7Z5L0 202 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 OR2D3Q8NGH3 330 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 FANCD2OSQ96PS1 177 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 PRNTQ86SH4 94 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 NEU4Q8WWR8 484 aaPredicted RBP16.86■□□□□ 0.29
CCDC38-201ENST00000344280 SNHG12Q9BXW3 62 aa16.86■□□□□ 0.29
CCDC38-201ENST00000344280 H3BRN7 92 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 RNF125Q96EQ8 232 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 PGLYRP4Q96LB8 373 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 CACNA1BQ00975 2339 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 TRBV19A0A075B6N1 114 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 ZNF785A8K8V0 405 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 NTF3P20783 257 aa16.85■□□□□ 0.29
CCDC38-201ENST00000344280 ALKBH7Q9BT30 221 aaPredicted RBP16.85■□□□□ 0.29
CCDC38-201ENST00000344280 VPS13CQ709C8 3753 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 NCBP2LA6PVI3 153 aaKnown RBP16.84■□□□□ 0.29
CCDC38-201ENST00000344280 IGLC2P0DOY2 106 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 NHLH1Q02575 133 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 PPP1R14DQ9NXH3 145 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 ZNF492Q9P255 531 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 DIRC3C9JPN6 131 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 F8W735 103 aaPredicted RBP16.84■□□□□ 0.29
CCDC38-201ENST00000344280 BPIFA4PQ86YQ2 179 aa16.84■□□□□ 0.29
CCDC38-201ENST00000344280 A8MWL6 223 aa16.83■□□□□ 0.28
CCDC38-201ENST00000344280 OR2J3O76001 311 aa16.83■□□□□ 0.28
CCDC38-201ENST00000344280 HOXB4P17483 251 aaPredicted RBP16.83■□□□□ 0.28
CCDC38-201ENST00000344280 FCGR2BP31994 310 aaPredicted RBP16.83■□□□□ 0.28
CCDC38-201ENST00000344280 SIGLEC15Q6ZMC9 328 aa16.83■□□□□ 0.28
CCDC38-201ENST00000344280 ATP5L2Q7Z4Y8 100 aa16.83■□□□□ 0.28
CCDC38-201ENST00000344280 ITPR1Q14643 2758 aa16.83■□□□□ 0.28
CCDC38-201ENST00000344280 IGLV11-55A0A075B6I3 123 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 MRPS12O15235 138 aaKnown RBP16.82■□□□□ 0.28
CCDC38-201ENST00000344280 IGHV3-23P01764 117 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 HBBP68871 147 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 VAMP8Q9BV40 100 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 GNG7O60262 68 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 C3orf79P0CE67 100 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 LY6DQ14210 128 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 CT83Q5H943 113 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 DTX2Q86UW9 622 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 ARPC1AQ92747 370 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 DAZAP1Q96EP5 407 aaKnown RBP16.82■□□□□ 0.28
CCDC38-201ENST00000344280 C20orf144Q9BQM9 153 aa16.82■□□□□ 0.28
CCDC38-201ENST00000344280 HLA-DRB1P01911 266 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 COL8A1P27658 744 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 ZNF562Q6V9R5 426 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 WI2-2373I1.2A0A1W2PRP0 233 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 NPIPB6E9PJ23 425 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 M0R3E3 92 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 KLF5Q13887 457 aaPredicted RBP16.81■□□□□ 0.28
CCDC38-201ENST00000344280 ZNF705AQ6ZN79 300 aaPredicted RBP16.81■□□□□ 0.28
CCDC38-201ENST00000344280 OR4F17Q8NGA8 305 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 ZC2HC1AQ96GY0 325 aa16.81■□□□□ 0.28
CCDC38-201ENST00000344280 Q8N6K4 173 aa16.8■□□□□ 0.28
CCDC38-201ENST00000344280 NPIPB5A8MRT5 1133 aa16.8■□□□□ 0.28
CCDC38-201ENST00000344280 FOXA3P55318 350 aaPredicted RBP16.8■□□□□ 0.28
CCDC38-201ENST00000344280 URB1-AS1Q96HZ7 61 aa16.8■□□□□ 0.28
CCDC38-201ENST00000344280 ZNF414Q96IQ9 312 aa16.8■□□□□ 0.28
CCDC38-201ENST00000344280 M0QZ24 198 aa16.79■□□□□ 0.28
CCDC38-201ENST00000344280 OVOL3O00110 214 aa16.79■□□□□ 0.28
CCDC38-201ENST00000344280 RNASEKQ6P5S7 137 aaKnown RBP16.79■□□□□ 0.28
CCDC38-201ENST00000344280 RBPMS2Q6ZRY4 209 aaKnown RBP16.79■□□□□ 0.28
CCDC38-201ENST00000344280 NDUFB8O95169 186 aa16.78■□□□□ 0.28
CCDC38-201ENST00000344280 RAB4AP20338 218 aa16.78■□□□□ 0.28
CCDC38-201ENST00000344280 Q56UQ5 140 aa16.78■□□□□ 0.28
CCDC38-201ENST00000344280 TTC9CQ8N5M4 171 aa16.78■□□□□ 0.28
CCDC38-201ENST00000344280 HSBP1O75506 76 aa16.77■□□□□ 0.28
CCDC38-201ENST00000344280 EGR2P11161 476 aaPredicted RBP16.77■□□□□ 0.28
CCDC38-201ENST00000344280 LCN12Q6JVE5 192 aa16.77■□□□□ 0.28
CCDC38-201ENST00000344280 C1orf122Q6ZSJ8 110 aa16.77■□□□□ 0.28
CCDC38-201ENST00000344280 MIEN1Q9BRT3 115 aa16.77■□□□□ 0.28
CCDC38-201ENST00000344280 GFRA4Q9GZZ7 299 aa16.77■□□□□ 0.28
CCDC38-201ENST00000344280 MFAP4P55083 255 aa16.77■□□□□ 0.27
CCDC38-201ENST00000344280 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.27
CCDC38-201ENST00000344280 M0R143 59 aa16.76■□□□□ 0.27
CCDC38-201ENST00000344280 RELQ04864 619 aaPredicted RBP16.76■□□□□ 0.27
CCDC38-201ENST00000344280 FAM120AOSQ5T036 256 aa16.76■□□□□ 0.27
CCDC38-201ENST00000344280 C16orf54Q6UWD8 224 aa16.76■□□□□ 0.27
CCDC38-201ENST00000344280 TMEM75Q8N9X5 138 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms