RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 MAP1LC3B2A6NCE7 125 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 KRBOX1C9JBD0 128 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 EBLN2Q6P2I7 272 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 DPPA3Q6W0C5 159 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 SIGLEC15Q6ZMC9 328 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 HAPLN4Q86UW8 402 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 LINC00052Q96N35 136 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 MAP1LC3BQ9GZQ8 125 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 TUBA4BQ9H853 241 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 FUT9Q9Y231 359 aa6.28□□□□□ -1.4
HMGCR-202ENST00000343975 OTOGQ6ZRI0 2925 aa6.27□□□□□ -1.4
HMGCR-202ENST00000343975 CXorf1O96002 111 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 GUK1Q16774 197 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 CST9LP1Q5W188 147 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 TEX261Q6UWH6 196 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 C9orf62Q8N4C0 152 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 BLNKQ8WV28 456 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 TMEM170AQ8WVE7 144 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 C2orf70A6NJV1 201 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 PMS2P5A8MQ11 134 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 CBLN1P23435 193 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 ADMP35318 185 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 VWC2Q2TAL6 325 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 CLLU1Q5K131 121 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 GBGT1Q8N5D6 347 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
HMGCR-202ENST00000343975 TAGLN2P37802 199 aaKnown RBP6.27□□□□□ -1.41
HMGCR-202ENST00000343975 PSMB3P49720 205 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 PSG9Q00887 426 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 MYOZ3Q8TDC0 251 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 SLC50A1Q9BRV3 221 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 OR51M1Q9H341 326 aa6.27□□□□□ -1.41
HMGCR-202ENST00000343975 TRAV25A0A0B4J276 109 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 F8W036 122 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 C11orf1Q9H5F2 150 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 RPH3ALQ9UNE2 315 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 LSM4Q9Y4Z0 139 aaKnown RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 TET2Q6N021 2002 aaPredicted RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 KLF5Q13887 457 aaPredicted RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 OR2K2Q8NGT1 345 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 NDFIP1Q9BT67 221 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 SHANK2-AS3Q9BTD1 123 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 HIST1H1EP10412 219 aaKnown RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 ZNF738Q8NE65 137 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 RAB24Q969Q5 203 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 SPAG8Q99932 426 aaPredicted RBP6.26□□□□□ -1.41
HMGCR-202ENST00000343975 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
HMGCR-202ENST00000343975 SSTP61278 116 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 NRN1Q9NPD7 142 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
HMGCR-202ENST00000343975 NKX6-2Q9C056 277 aaPredicted RBP6.25□□□□□ -1.41
HMGCR-202ENST00000343975 RPRMQ9NS64 109 aa6.25□□□□□ -1.41
HMGCR-202ENST00000343975 A8MWP6 167 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 OR11H12B2RN74 326 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 NBEAP1P0C6P0 100 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PLP1P60201 277 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 KLK9Q2XQG4 91 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 HIST2H2BDQ6DRA6 164 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 UNQ9165/PRO28630Q6UXU0 137 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 RXFP4Q8TDU9 374 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 EIF5A2Q9GZV4 153 aaKnown RBP6.24□□□□□ -1.41
HMGCR-202ENST00000343975 SH3BGRL3Q9H299 93 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 HRH4Q9H3N8 390 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 KLK9Q9UKQ9 250 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRSS46E5RG02 174 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
HMGCR-202ENST00000343975 CRYBB3P26998 211 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 NUTF2P61970 127 aaKnown RBP6.24□□□□□ -1.41
HMGCR-202ENST00000343975 OR10J6PQ8NGY7 276 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 OR10J4P0C629 311 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 CEBPGP53567 150 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRR20EP86478 221 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRR20CP86479 221 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRR20DP86480 221 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRR20BP86481 221 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 PRR20AP86496 221 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 LEMD1Q68G75 181 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 MIR17HGQ75NE6 70 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 LINC00482Q8N8I6 264 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 SAT2Q96F10 170 aaPredicted RBP6.24□□□□□ -1.41
HMGCR-202ENST00000343975 BIN3Q9NQY0 253 aa6.24□□□□□ -1.41
HMGCR-202ENST00000343975 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 H3BRN7 92 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 CHEK1O14757 476 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 GNG13Q9P2W3 67 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 TMEM213A2RRL7 107 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 GP9P14770 177 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 SULT1A2P50226 295 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 UBE2G1P62253 170 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 RANP62826 216 aaKnown RBP6.23□□□□□ -1.41
HMGCR-202ENST00000343975 KIAA0141Q14154 515 aaPredicted RBP6.23□□□□□ -1.41
HMGCR-202ENST00000343975 IGLL1P15814 213 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms