RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 LOC107984156A0A0G2JMH3 177 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 NUTF2P61970 127 aaKnown RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 C15orf32Q32M92 178 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 ARL17AQ8IVW1 177 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 C11orf52Q96A22 123 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 NUP210Q8TEM1 1887 aaPredicted RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 ASIPP42127 132 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 ZNF138P52744 262 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 CACNG7P62955 275 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRR30Q53SZ7 412 aaPredicted RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 CRIP3Q6Q6R5 217 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 CHCHD1Q96BP2 118 aaKnown RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 MRPL27Q9P0M9 148 aaKnown RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 PPBPP02775 128 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PLP1P60201 277 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 ZNF329Q86UD4 541 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 FAM168AQ92567 244 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 A0A1W2PNU3 283 aaPredicted RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 TTC9CQ8N5M4 171 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 FAM181BA6NEQ2 426 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 A6NNC1 897 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 EREGO14944 169 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 CIDEAO60543 219 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
VCAN-202ENST00000342785 PRSS2P07478 247 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 TDGF1P13385 188 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 PYGO2Q9BRQ0 406 aa5.81□□□□□ -1.48
VCAN-202ENST00000342785 ABCA2Q9BZC7 2435 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 USP9YO00507 2555 aaPredicted RBP5.8□□□□□ -1.48
VCAN-202ENST00000342785 TMEM238LA0A1B0GVL6 79 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 A6NJY4 79 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 PCP4P48539 62 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 SYT8Q8NBV8 401 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 OOSP1A8MZH6 123 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 TOMM40O96008 361 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 RPL13AP40429 203 aaKnown RBP5.8□□□□□ -1.48
VCAN-202ENST00000342785 FBLN7Q53RD9 439 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 DDB2Q92466 427 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 ST20Q9HBF5 79 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 YLPM1P49750 1951 aaKnown RBP5.8□□□□□ -1.48
VCAN-202ENST00000342785 PRTN3P24158 256 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 TSPOP30536 169 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 DIAPH2-AS1Q14236 149 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 Q6ZPA2 131 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 LURAP1LQ8IV03 231 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 Q8TAT8 98 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 DKK4Q9UBT3 224 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 V9GYV3 84 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 LY6DQ14210 128 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 TMEM249Q2WGJ8 235 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 PSMG4Q5JS54 123 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 ZNF833PQ6ZTB9 187 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 C18orf32Q8TCD1 76 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 ZNF124Q15973 351 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 TEX36Q5VZQ5 186 aa5.8□□□□□ -1.48
VCAN-202ENST00000342785 POLR3KQ9Y2Y1 108 aaPredicted RBP5.8□□□□□ -1.48
VCAN-202ENST00000342785 NCR2O95944 276 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 SNRPD3P62318 126 aaKnown RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 ZNF56Q15929 161 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 SCGB3A1Q96QR1 104 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 FNDC4Q9H6D8 234 aaPredicted RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 TPSG1Q9NRR2 321 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 CNTFRP26992 372 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 LEPP41159 167 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 Q86TA4 180 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 C20orf144Q9BQM9 153 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 NXT2Q9NPJ8 142 aaKnown RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 LSM4Q9Y4Z0 139 aaKnown RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 PCNX3Q9H6A9 2034 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 NPIPB6E9PJ23 425 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 WISP2O76076 250 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 VWC2Q2TAL6 325 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 IGFL4Q6B9Z1 124 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 LINC00311Q8N616 119 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 SHANK2-AS3Q9BTD1 123 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 USP9XQ93008 2570 aaPredicted RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 D6R8Y8 96 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 CEACAM4O75871 244 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 EFNA4P52798 201 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 C3orf36Q3SXR2 165 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 DMRTC2Q8IXT2 367 aaPredicted RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 SETD2Q9BYW2 2564 aaPredicted RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 COX6B1P14854 86 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 MINOS1Q5TGZ0 78 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 PIP4P1Q86T03 277 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 LYPD1Q8N2G4 141 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 MINOS1-NBL1R4GNA1 71 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 C10orf142B7Z368 130 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.79□□□□□ -1.48
VCAN-202ENST00000342785 ZNF562Q6V9R5 426 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 CCL19Q99731 98 aa5.79□□□□□ -1.48
VCAN-202ENST00000342785 TLN2Q9Y4G6 2542 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 DLEU1O43261 78 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 TGFAP01135 160 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 GLMPQ8WWB7 406 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 PPP1R17O96001 155 aa5.78□□□□□ -1.48
VCAN-202ENST00000342785 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms