RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 CRYBB3P26998 211 aa11.78□□□□□ -0.52
PBX3-201ENST00000342287 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
PBX3-201ENST00000342287 TMEM70Q9BUB7 260 aa11.78□□□□□ -0.52
PBX3-201ENST00000342287 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
PBX3-201ENST00000342287 FLNCQ14315 2725 aa11.77□□□□□ -0.52
PBX3-201ENST00000342287 DCHS2Q6V1P9 2916 aa11.77□□□□□ -0.52
PBX3-201ENST00000342287 HIST1H1EP10412 219 aaKnown RBP11.77□□□□□ -0.53
PBX3-201ENST00000342287 TMEM136Q6ZRR5 245 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 OR5AN1Q8NGI8 311 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.77□□□□□ -0.53
PBX3-201ENST00000342287 MT-ND6P03923 174 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 REG1BP48304 166 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 VSTM2AQ8TAG5 236 aa11.77□□□□□ -0.53
PBX3-201ENST00000342287 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
PBX3-201ENST00000342287 IGLV1-47P01700 117 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 IGHV4-39P01824 125 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 IGKV1-16P04430 117 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 SEC11AP67812 179 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
PBX3-201ENST00000342287 M0R1W7 72 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 C18orf32Q8TCD1 76 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 NABP2Q9BQ15 211 aa11.76□□□□□ -0.53
PBX3-201ENST00000342287 MCRIP2Q9BUT9 160 aaKnown RBP11.76□□□□□ -0.53
PBX3-201ENST00000342287 H3BRM9 83 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 Q8N7P7 452 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 OSR1Q8TAX0 266 aaPredicted RBP11.75□□□□□ -0.53
PBX3-201ENST00000342287 SPATA25Q9BR10 227 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 TNFRSF18Q9Y5U5 241 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 MYO18BQ8IUG5 2567 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 SPTAN1Q13813 2472 aaKnown RBP11.75□□□□□ -0.53
PBX3-201ENST00000342287 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 B5MCH6 92 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 H0Y8G0 127 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 J3QR89 54 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 K7EN84 100 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 COX6B1P14854 86 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 DLX1P56177 255 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 BPESC1Q9GZL8 116 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
PBX3-201ENST00000342287 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 BUB1B-PAK6H3BSN5 160 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 ARL3P36405 182 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 ADAMTSL5Q6ZMM2 481 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 BPIFA4PQ86YQ2 179 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 DPF1Q92782 380 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 FLYWCH2Q96CP2 140 aaKnown RBP11.74□□□□□ -0.53
PBX3-201ENST00000342287 CA1P00915 261 aaPredicted RBP11.74□□□□□ -0.53
PBX3-201ENST00000342287 APCSP02743 223 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 COX7A1P24310 79 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 PDLIM3Q53GG5 364 aaPredicted RBP11.74□□□□□ -0.53
PBX3-201ENST00000342287 PRR31Q5SQ13 230 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 AMMECR1Q9Y4X0 333 aaPredicted RBP11.74□□□□□ -0.53
PBX3-201ENST00000342287 COL12A1Q99715 3063 aa11.74□□□□□ -0.53
PBX3-201ENST00000342287 A6NDN8 102 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 C15orf61A6NNL5 157 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 SRRM4A7MD48 611 aaKnown RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 PRB3Q04118 309 aaPredicted RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 KIR3DS1Q14943 382 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 KCNIP2Q9NS61 270 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 A0A1W2PPM0 123 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 SH2D7A6NKC9 451 aaPredicted RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 PRTN3P24158 256 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 LMO4P61968 165 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 RPS16P62249 146 aaKnown RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 SPINK9Q5DT21 86 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 HARBI1Q96MB7 349 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 TMEM14BQ9NUH8 114 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 FOXA2Q9Y261 457 aaPredicted RBP11.73□□□□□ -0.53
PBX3-201ENST00000342287 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
PBX3-201ENST00000342287 TMEM189A5PLL7 270 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
PBX3-201ENST00000342287 FXYD3Q14802 87 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 FA2HQ7L5A8 372 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
PBX3-201ENST00000342287 A1L4Q6 167 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 UPK2O00526 184 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 FABP2P12104 132 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 CX3CL1P78423 397 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 C2orf91Q6ZV80 131 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 FAM168AQ92567 244 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 PMCHL2Q9BQD1 86 aa11.72□□□□□ -0.53
PBX3-201ENST00000342287 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 HLA-DRB1P01911 266 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms