RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 Q6ZVH6 145 aa7.59□□□□□ -1.2
TRERF1-201ENST00000340840 PPP1R27Q86WC6 154 aa7.59□□□□□ -1.2
TRERF1-201ENST00000340840 TMEM133Q9H2Q1 129 aa7.59□□□□□ -1.2
TRERF1-201ENST00000340840 FBXL15Q9H469 300 aa7.59□□□□□ -1.2
TRERF1-201ENST00000340840 WISP2O76076 250 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 PSG1P11464 419 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 FCGR2BP31994 310 aaPredicted RBP7.58□□□□□ -1.2
TRERF1-201ENST00000340840 NAV3Q8IVL0 2385 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 ZNF138P52744 262 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 SLC25A39Q9BZJ4 359 aaPredicted RBP7.58□□□□□ -1.2
TRERF1-201ENST00000340840 THYN1Q9P016 225 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 ONECUT1Q9UBC0 465 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 PSG8Q9UQ74 426 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 MUC21A0A0G2JKD1 596 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 MUC21A0A140T8X8 626 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 TMEM178BH3BS89 294 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 SNAI2O43623 268 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 IL4P05112 153 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 CKS2P33552 79 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 SEC11AP67812 179 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 MUC21Q5SSG8 566 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 AMMECR1LQ6DCA0 310 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 ZNF841Q6ZN19 808 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 EXOC3-AS1Q8N2X6 119 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 LINC00311Q8N616 119 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 NUP37Q8NFH4 326 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 PRELID3AQ96N28 172 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 DKK4Q9UBT3 224 aa7.58□□□□□ -1.2
TRERF1-201ENST00000340840 PRRC2CQ9Y520 2896 aaKnown RBP7.58□□□□□ -1.2
TRERF1-201ENST00000340840 C2orf70A6NJV1 201 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 CD5LO43866 347 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 CEACAM3P40198 252 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 TNFRSF14Q92956 283 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 LINC00574Q9H8X3 128 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 KLF12Q9Y4X4 402 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 F11RQ9Y624 299 aaKnown RBP7.57□□□□□ -1.2
TRERF1-201ENST00000340840 NDUFB8O95169 186 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 CD24P25063 80 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 BSPH1Q075Z2 132 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 GDF5OSQ5U4N7 250 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 RAB1BQ9H0U4 201 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 IGHV2-70DA0A0C4DH43 119 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 LTAP01374 205 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 NMUP48645 174 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 PKD1L2Q7Z442 2459 aa7.57□□□□□ -1.2
TRERF1-201ENST00000340840 CSPG4Q6UVK1 2322 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 A0A087X0K7 114 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 C7orf71A4D174 169 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
TRERF1-201ENST00000340840 TMEM97Q5BJF2 176 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 FAM57AQ8TBR7 257 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 TIMD4Q96H15 378 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 ZNF414Q96IQ9 312 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 HAX1O00165 279 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 PRSS1P07477 247 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 BMI1P35226 326 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 PVRIGQ6DKI7 326 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 MCRIP2Q9BUT9 160 aaKnown RBP7.56□□□□□ -1.2
TRERF1-201ENST00000340840 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 CD3EP07766 207 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 RNASE8Q8TDE3 154 aaKnown RBP7.56□□□□□ -1.2
TRERF1-201ENST00000340840 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 ORM1P02763 201 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 TCTAP57738 103 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 TWIST1Q15672 202 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 ADIPOQQ15848 244 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 BVES-AS1Q5T3Y7 98 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 ARL6IP6Q8N6S5 226 aa7.56□□□□□ -1.2
TRERF1-201ENST00000340840 ARFGEF3Q5TH69 2177 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 WDFY4Q6ZS81 3184 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 E7EUB6 86 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 ARMS2P0C7Q2 107 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 RPL7P18124 248 aaKnown RBP7.55□□□□□ -1.2
TRERF1-201ENST00000340840 MFAP4P55083 255 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 DIAPH2-AS1Q14236 149 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 RPRMLQ8N4K4 120 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 RNF125Q96EQ8 232 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 MALRD1Q5VYJ5 2156 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 PPIAL4CA0A0B4J2A2 164 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 ZNF785A8K8V0 405 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 PPIAL4GP0DN37 164 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 PSG9Q00887 426 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 LYPD2Q6UXB3 125 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 KIR3DL3Q8N743 410 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 TET2Q6N021 2002 aaPredicted RBP7.55□□□□□ -1.2
TRERF1-201ENST00000340840 IGKV1D-37A0A075B6S9 117 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 PSMB11A5LHX3 300 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 NCBP2LA6PVI3 153 aaKnown RBP7.55□□□□□ -1.2
TRERF1-201ENST00000340840 C22orf46C9J442 243 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 LINC00173Q6ZV60 143 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 LYPD1Q8N2G4 141 aa7.55□□□□□ -1.2
TRERF1-201ENST00000340840 C8orf31Q8N9H6 132 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms