RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZNF134P52741 427 aa12.04□□□□□ -0.48
RRP1B-201ENST00000340648 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
RRP1B-201ENST00000340648 Q8TAT8 98 aa12.04□□□□□ -0.48
RRP1B-201ENST00000340648 Q6ZSR3 168 aa12.04□□□□□ -0.48
RRP1B-201ENST00000340648 A0A1B0GWJ7 208 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 DUX4L9Q6RFH8 374 aaPredicted RBP12.03□□□□□ -0.48
RRP1B-201ENST00000340648 C15orf65H3BRN8 121 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 TRGV3P03979 118 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 CD59P13987 128 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 PDLIM4P50479 330 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 SPACA3Q8IXA5 215 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 CST9LQ9H4G1 147 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 A0A1W2PPI3 338 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 RNF138Q8WVD3 245 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
RRP1B-201ENST00000340648 SIGMAR1Q99720 223 aa12.03□□□□□ -0.48
RRP1B-201ENST00000340648 SH2D1AO60880 128 aa12.02□□□□□ -0.48
RRP1B-201ENST00000340648 IGHV1-3A0A0C4DH29 117 aa12.02□□□□□ -0.49
RRP1B-201ENST00000340648 OCIAD2Q56VL3 154 aa12.02□□□□□ -0.49
RRP1B-201ENST00000340648 JMJD8Q96S16 334 aa12.02□□□□□ -0.49
RRP1B-201ENST00000340648 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
RRP1B-201ENST00000340648 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.49
RRP1B-201ENST00000340648 PSG3Q16557 428 aa12.02□□□□□ -0.49
RRP1B-201ENST00000340648 IGFL4Q6B9Z1 124 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 TMEM178BH3BS89 294 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 CRXO43186 299 aaPredicted RBP12.01□□□□□ -0.49
RRP1B-201ENST00000340648 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
RRP1B-201ENST00000340648 ITGB1BP1O14713 200 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 SNCGO76070 127 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
RRP1B-201ENST00000340648 VWC2Q2TAL6 325 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
RRP1B-201ENST00000340648 NUP210Q8TEM1 1887 aaPredicted RBP12□□□□□ -0.49
RRP1B-201ENST00000340648 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 DKK1O94907 266 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 GLMPQ8WWB7 406 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 FAM168AQ92567 244 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 NDUFA4L2Q9NRX3 87 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 YLPM1P49750 1951 aaKnown RBP12□□□□□ -0.49
RRP1B-201ENST00000340648 CFHR2P36980 270 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 LYPD2Q6UXB3 125 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 TNFRSF14Q92956 283 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 C11orf1Q9H5F2 150 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 FAM231BA6NCW3 169 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 NPIPB6E9PJ23 425 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 SLC50A1Q9BRV3 221 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 CADP27708 2225 aa12□□□□□ -0.49
RRP1B-201ENST00000340648 PRR20EP86478 221 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 PRR20CP86479 221 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 PRR20DP86480 221 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 PRR20BP86481 221 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 PRR20AP86496 221 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 KIAA1549LQ6ZVL6 1849 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 ABCA1O95477 2261 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.99□□□□□ -0.49
RRP1B-201ENST00000340648 RHOGP84095 191 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 FAM231DQ6ZW35 169 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 MTURNQ8N3F0 131 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
RRP1B-201ENST00000340648 HOXA3O43365 443 aaPredicted RBP11.99□□□□□ -0.49
RRP1B-201ENST00000340648 ZNF815PA8K554 130 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
RRP1B-201ENST00000340648 PLA2G5P39877 138 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 FAM106AQ4KMX7 169 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
RRP1B-201ENST00000340648 ZNF474Q6S9Z5 364 aaPredicted RBP11.99□□□□□ -0.49
RRP1B-201ENST00000340648 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 MMP23AO75900 390 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 ZNF492Q9P255 531 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 PPP1R17O96001 155 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 ESDP10768 282 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 TMEM249Q2WGJ8 235 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 KRTAP27-1Q3LI81 207 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 IGHG3P01860 377 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 ZC2HC1BQ5TFG8 222 aa11.98□□□□□ -0.49
RRP1B-201ENST00000340648 CEACAM4O75871 244 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 IGHV3-11P01762 117 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 EMP1P54849 157 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 LAGE3Q14657 143 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 ADIPOQQ15848 244 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 WT1-ASQ06250 92 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 DYNLRB2Q8TF09 96 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 SMPXQ9UHP9 88 aa11.97□□□□□ -0.49
RRP1B-201ENST00000340648 SRRM4A7MD48 611 aaKnown RBP11.96□□□□□ -0.49
RRP1B-201ENST00000340648 CD300EQ496F6 205 aaPredicted RBP11.96□□□□□ -0.49
RRP1B-201ENST00000340648 INTS1Q8N201 2190 aaKnown RBP11.96□□□□□ -0.49
RRP1B-201ENST00000340648 KLRD1Q13241 179 aa11.96□□□□□ -0.49
RRP1B-201ENST00000340648 CT83Q5H943 113 aa11.96□□□□□ -0.49
RRP1B-201ENST00000340648 KIF26AQ9ULI4 1882 aaPredicted RBP11.96□□□□□ -0.49
RRP1B-201ENST00000340648 CNTFRP26992 372 aa11.96□□□□□ -0.5
RRP1B-201ENST00000340648 ORMDL2Q53FV1 153 aa11.96□□□□□ -0.5
RRP1B-201ENST00000340648 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.5
RRP1B-201ENST00000340648 SSBP2P81877 361 aaPredicted RBP11.96□□□□□ -0.5
RRP1B-201ENST00000340648 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms