RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 HSPB8Q9UJY1 196 aa10.22□□□□□ -0.77
LIN54-201ENST00000340417 SLURP1P55000 103 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 RARRES2Q99969 163 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 PARLQ9H300 379 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 MYCNOSP40205 109 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 ZNF138P52744 262 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 ZNF502Q8TBZ5 544 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 NDUFA4L2Q9NRX3 87 aa10.21□□□□□ -0.77
LIN54-201ENST00000340417 TMEM218A2RU14 115 aa10.21□□□□□ -0.78
LIN54-201ENST00000340417 MLANAQ16655 118 aa10.21□□□□□ -0.78
LIN54-201ENST00000340417 KRTAP27-1Q3LI81 207 aa10.21□□□□□ -0.78
LIN54-201ENST00000340417 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 SIRPDQ9H106 197 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 ATP5G3P48201 142 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 PSG3Q16557 428 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 OR10J3Q5JRS4 329 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 CHAC2Q8WUX2 184 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 DPH3P1Q9H4G8 78 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 GCSHP23434 173 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 CITED2Q99967 270 aaPredicted RBP10.2□□□□□ -0.78
LIN54-201ENST00000340417 GGTLC1Q9BX51 225 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 MSMPQ1L6U9 139 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 C22orf34Q6ZV56 151 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 ZFP30Q9Y2G7 519 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 IGHV3-73A0A0B4J1V6 119 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 GCSAMLQ5JQS6 135 aa10.2□□□□□ -0.78
LIN54-201ENST00000340417 EREGO14944 169 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 PPIFP30405 207 aaKnown RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 TTC9CQ8N5M4 171 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 CLRN3Q8NCR9 226 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 C2orf88Q9BSF0 95 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 CFAP161Q6P656 301 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 COL5A1P20908 1838 aaPredicted RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 M0R3E3 92 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 FOLR2P14207 255 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 RPP21Q9H633 154 aaKnown RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 TMEM14BQ9NUH8 114 aa10.19□□□□□ -0.78
LIN54-201ENST00000340417 TNFRSF13BO14836 293 aaPredicted RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
LIN54-201ENST00000340417 ANKHD1Q8IWZ3 2542 aaKnown RBP10.18□□□□□ -0.78
LIN54-201ENST00000340417 KNCNA6PVL3 124 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 TAS2R60P59551 318 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 MGST2Q99735 147 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 IGHV7-4-1A0A0J9YVY3 117 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 C7orf77A4D0Y5 90 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 FOSL1P15407 271 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 Q8N7P7 452 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 SDHCQ99643 169 aaPredicted RBP10.18□□□□□ -0.78
LIN54-201ENST00000340417 ALKBH7Q9BT30 221 aaPredicted RBP10.18□□□□□ -0.78
LIN54-201ENST00000340417 A0A1W2PRE2 83 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 SCGB1C2P0DMR2 95 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 CACNG7P62955 275 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 RFNGQ9Y644 331 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 H3BVH4 76 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 SFRP2Q96HF1 295 aa10.18□□□□□ -0.78
LIN54-201ENST00000340417 CFHR3Q02985 330 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 Q5BKY6 102 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 C5orf56Q8N8D9 126 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 MT-ND6P03923 174 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 MEIG1Q5JSS6 88 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 ISOC2Q96AB3 205 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
LIN54-201ENST00000340417 CDSNQ15517 529 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
LIN54-201ENST00000340417 KRTAP10-9P60411 292 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 HBBP68871 147 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 Q6AWC8 147 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 TMEM191AQ9H0A3 160 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
LIN54-201ENST00000340417 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 SHANK2-AS3Q9BTD1 123 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 FGF23Q9GZV9 251 aaPredicted RBP10.16□□□□□ -0.78
LIN54-201ENST00000340417 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
LIN54-201ENST00000340417 ZNF106Q9H2Y7 1883 aaKnown RBP10.16□□□□□ -0.78
LIN54-201ENST00000340417 TRAV8-6A0A0B4J262 113 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 C15orf62A8K5M9 175 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 MDKP21741 143 aaPredicted RBP10.16□□□□□ -0.78
LIN54-201ENST00000340417 COTL1Q14019 142 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 C11orf71Q6IPW1 123 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 ST20Q9HBF5 79 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 TOMM7Q9P0U1 55 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 CD300CQ08708 224 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 ELOBQ15370 118 aa10.16□□□□□ -0.78
LIN54-201ENST00000340417 C1orf147Q96MC9 270 aaPredicted RBP10.16□□□□□ -0.78
LIN54-201ENST00000340417 SPATA31B1PQ5VZV4 182 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 NDUFA11Q86Y39 141 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 LOC102724200A0A096LPH7 203 aaPredicted RBP10.15□□□□□ -0.78
LIN54-201ENST00000340417 Q6YL49 198 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 A0A0G2JRQ6 117 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 IGHV7-81A0A0B4J1V7 117 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 TMEM14EPQ6UXP3 125 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 NPBQ8NG41 125 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 Q8TAT8 98 aa10.15□□□□□ -0.78
LIN54-201ENST00000340417 C1orf194Q5T5A4 169 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms