RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 HIST1H2BDP58876 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H2BCP62807 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST2H2BEQ16778 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 CLEC19AQ6UXS0 136 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H2BHQ93079 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 IGF2BP2-AS1Q96M15 143 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 CCDC140Q96MF4 163 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H2BNQ99877 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H2BMQ99879 126 aa5.76□□□□□ -1.49
SRFBP1-201ENST00000339397 TRBV24-1A0A075B6N3 115 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 WI2-2373I1.2A0A1W2PRP0 233 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF98A6NK75 572 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF207O43670 478 aaKnown RBP5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 IGHV4-59P01825 116 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 PAX1P15863 534 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 ERVFC1-1P60608 527 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 FABP9Q0Z7S8 132 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 PRR31Q5SQ13 230 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 CIARTQ8N365 385 aaPredicted RBP5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 KLK15Q9H2R5 256 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 Q9H3A6 140 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 EPDR1Q9UM22 224 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 TRBV9A0A0B4J1U6 114 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 PPP5D1E7EU14 171 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 M0R3E3 92 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 PEX7O00628 323 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 NDUFS6O75380 124 aaKnown RBP5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 TRBV12-3P01733 135 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 TRGC1P0CF51 173 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 DEFB112Q30KQ8 113 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 PDZD11Q5EBL8 140 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 LINC00322Q6ZN03 302 aaPredicted RBP5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 OR10G8Q8NGN5 311 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 FAM110DQ8TAY7 271 aaPredicted RBP5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 SHANK2-AS3Q9BTD1 123 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 BIN3Q9NQY0 253 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 MOB4Q9Y3A3 225 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 SELENOKQ9Y6D0 94 aa5.75□□□□□ -1.49
SRFBP1-201ENST00000339397 C9JCJ5 164 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 H3BRN7 92 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 MRPS12O15235 138 aaKnown RBP5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 APOHP02749 345 aaPredicted RBP5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 S100A6P06703 90 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 TCL1AP56279 114 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 NDUFA6P56556 154 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 CTAG1AP78358 180 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 DEFB113Q30KQ7 82 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 Q5PR19 223 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 PRR27Q6MZM9 219 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 C10orf99Q6UWK7 81 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 REC114Q7Z4M0 266 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 LINC01356Q8N9X3 169 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 OR1L6Q8NGR2 347 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF502Q8TBZ5 544 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 DUX5Q96PT3 197 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 OR5B12Q96R08 314 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 PYGO2Q9BRQ0 406 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 GNB4Q9HAV0 340 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 V9GYV3 84 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 FLNBO75369 2602 aaKnown RBP5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 IFITM10A6NMD0 228 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 SLC25A16P16260 332 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 YPEL3P61236 119 aaPredicted RBP5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 BAGE2Q86Y30 109 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 KRTAP1-3Q8IUG1 177 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 Q96MF0 132 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 THYN1Q9P016 225 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 ARL2-SNX15V9GYD0 113 aa5.74□□□□□ -1.49
SRFBP1-201ENST00000339397 TRAV41A0A0B4J266 112 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 ZNF320A2RRD8 509 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 A6NDX4 124 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 IGHV3-11P01762 117 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 IGLC2P0DOY2 106 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 DSCR9P59020 149 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 TOMM20LQ6UXN7 152 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 CDC42EP3Q9UKI2 254 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 TRBV19A0A075B6N1 114 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 A0A1B0GUS0 222 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 GGCTO75223 188 aaKnown RBP5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 IGHV4-31P0DP07 118 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 HIST1H1EP10412 219 aaKnown RBP5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 HLA-DMBP28068 263 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 C19orf54Q5BKX5 351 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 IL17RELQ6ZVW7 336 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 WFDC11Q8NEX6 87 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 STXBP6Q8NFX7 210 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 SERTAD4Q9NUC0 356 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 SMAD5-AS1Q9Y6J3 95 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 SORL1Q92673 2214 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 TRAV20A0A0B4J274 112 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 CLPSL1A2RUU4 121 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 GCGP01275 180 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 TCRAP04437 139 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 PLA2G2AP14555 144 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 S100PP25815 95 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 GOLT1AQ6ZVE7 132 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 BPIFA4PQ86YQ2 179 aa5.73□□□□□ -1.49
SRFBP1-201ENST00000339397 OR8I2Q8N0Y5 310 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms