RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TPTE2P1Q5T6R2 138 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 ERVK11-1P61568 191 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 SPACA3Q8IXA5 215 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 PROK2Q9HC23 129 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 GUSBP1Q15486 140 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 C5orf64Q2M2E5 130 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 FAM208BQ5VWN6 2430 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 SYS1-DBNDD2H3BUS1 97 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 SMPXQ9UHP9 88 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 NOTCH4Q99466 2003 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 WIPF3A6NGB9 483 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 IGKV1-39P01597 117 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 IGKV1D-39P04432 117 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 KLRD1Q13241 179 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 Q8TAT8 98 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
RTN4-202ENST00000337526 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
RTN4-202ENST00000337526 PCNX2A6NKB5 2137 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 FXYD7P58549 80 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 SELENOKQ9Y6D0 94 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 ITGB1BP1O14713 200 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 OVOL1O14753 267 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
RTN4-202ENST00000337526 SRSF6Q13247 344 aaKnown RBP11.19□□□□□ -0.62
RTN4-202ENST00000337526 CD300EQ496F6 205 aaPredicted RBP11.19□□□□□ -0.62
RTN4-202ENST00000337526 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
RTN4-202ENST00000337526 A0A1B0GUS0 222 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 BUB1B-PAK6H3BSN5 160 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 ZFHX2Q9C0A1 2572 aaPredicted RBP11.18□□□□□ -0.62
RTN4-202ENST00000337526 A8MWP6 167 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 SRD5A1P18405 259 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 TRAV41A0A0B4J266 112 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 TRAV40A0A0B4J280 105 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 SAMD5Q5TGI4 173 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
RTN4-202ENST00000337526 A0A087X0K7 114 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 A0A0G2JNJ9 132 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.17□□□□□ -0.62
RTN4-202ENST00000337526 DUSP14O95147 198 aaKnown RBP11.17□□□□□ -0.62
RTN4-202ENST00000337526 TSPAN13O95857 204 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 LAGE3Q14657 143 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 ZNF726P1Q15940 193 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 LINC01559Q495D7 138 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 LYPD1Q8N2G4 141 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 Q9UFV3 132 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 TOMM40O96008 361 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 Q0VG73 95 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 ACACBO00763 2458 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 IL15RAQ13261 267 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 PSG3Q16557 428 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
RTN4-202ENST00000337526 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 PF4P02776 101 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 Q6ZS92 163 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 PLXND1Q9Y4D7 1925 aa11.17□□□□□ -0.62
RTN4-202ENST00000337526 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 ZNF329Q86UD4 541 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
RTN4-202ENST00000337526 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 TRAV8-2A0A0B4J237 113 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 CNTFRP26992 372 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 CYYR1Q96J86 154 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 PLXNA4Q9HCM2 1894 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 SH2D1AO60880 128 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 MINOS1Q5TGZ0 78 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 ZGRF1Q86YA3 2104 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 MINOS1-NBL1R4GNA1 71 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 IGHV2-5P01817 119 aa11.16□□□□□ -0.62
RTN4-202ENST00000337526 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 SMAD7O15105 426 aaKnown RBP11.15□□□□□ -0.62
RTN4-202ENST00000337526 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 PEMTQ9UBM1 199 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 EREGO14944 169 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 PLNP26678 52 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 Q6ZR03 302 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
RTN4-202ENST00000337526 LINC01549A6NIU2 74 aa11.15□□□□□ -0.63
RTN4-202ENST00000337526 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms